myRT

myRT report for GCA_000157915.1_ASM15791v1

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Seq: EQ973637.1 Bacteroides coprophilus DSM 18228 = JCM 13818 genomic scaffold Scfld9, whole genome shotgun sequence (247317 bp)
Overview 1 RT 1: 113721-121450 bp Neighborhood of RT #1 [113721, 121450] N6_Mtase COG4646 RVT_N RVT-GII GIIM Feature: gene Location: 113721-117054 bp Ori: EEF75997.1 Feature: domain Description: N6_Mtase Location: 114249-114675 bp Feature: domain Description: N6_Mtase Location: 1 1 4249-1 1 4675 bp Feature: domain Description: COG4646 Location: 115176-117054 bp Feature: domain Description: COG4646 Location: 1 1 51 76-1 1 7054 bp Feature: gene Location: 117266-117933 bp Feature: gene Location: 118590-120257 bp Ori: EEF75999.1 Feature: domain Description: RVT_N Location: 118644-118887 bp Feature: domain Description: RVT_N Location: 1 1 8644-1 1 8887 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 118932-119580 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 8932-1 1 9580 bp Feature: domain Description: GIIM Note: maturase Location: 119634-119865 bp Feature: domain Description: GIIM Note: maturase Location: 1 1 9634-1 1 9865 bp Feature: gene Location: 120241-121344 bp Feature: gene Location: 121331-121450 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT N6_Mtase (pfam02384), COG4646 (Adenine-specific DNA methylase, N12 class ), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)

Seq: EQ973676.1 Bacteroides coprophilus DSM 18228 = JCM 13818 genomic scaffold Scfld76, whole genome shotgun sequence (1240 bp)
Overview 1 RT 1: 336-1239 bp Neighborhood of RT #1 [336, 1240] RVT-GII Feature: gene Location: 336-1240 bp Ori: EEF78346.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 678-1239 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 678-12 39 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: EQ973631.1 Bacteroides coprophilus DSM 18228 = JCM 13818 genomic scaffold Scfld3, whole genome shotgun sequence (269673 bp)
Overview 1 RT 1: 36791-43583 bp Neighborhood of RT #1 [36791, 43612] RVT-UG3 PRK15483 Mod T3RM_EcoP15I_C Feature: gene Location: 36791-37157 bp Feature: gene Location: 37145-38575 bp Ori: EEF74676.1 Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 37595-38114 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 3 7595-3 8114 bp Feature: gene Location: 38743-41709 bp Ori: EEF74677.1 Feature: domain Description: PRK15483 Location: 38746-41704 bp Feature: domain Description: PRK15483 Location: 3 8746-41704 bp Feature: gene Location: 41711-43612 bp Ori: EEF74678.1 Feature: domain Description: Mod Location: 41807-42950 bp Feature: domain Description: Mod Location: 41807-42950 bp Feature: domain Description: T3RM_EcoP15I_C Location: 43298-43583 bp Feature: domain Description: T3 RM_EcoP15I_C Location: 43 298-43 583 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG3, PRK15483 (type III restriction-modification system endonuclease), Mod (COG2189), T3RM_EcoP15I_C (pfam18273)

Seq: EQ973635.1 Bacteroides coprophilus DSM 18228 = JCM 13818 genomic scaffold Scfld7, whole genome shotgun sequence (260923 bp)
Overview 1 RT 1: 20809-27013 bp Neighborhood of RT #1 [20809, 27027] Relaxase YWFCY RVT_N RVT-GII GIIM TraG-D_C PRK05449 Feature: gene Location: 20809-22059 bp Ori: EEF75593.1 Feature: domain Description: Relaxase Location: 20992-21316 bp Feature: domain Description: Relaxase Location: 20992-21316 bp Feature: gene Location: 22092-23018 bp Ori: EEF75594.1 Feature: domain Description: YWFCY Location: 22101-22278 bp Feature: domain Description: YWFCY Location: 22101-22278 bp Feature: gene Location: 23655-25307 bp Ori: EEF75595.1 Feature: domain Description: RVT_N Location: 23709-23952 bp Feature: domain Description: RVT_N Location: 23709-23952 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 23997-24645 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 23997-24 64 5 bp Feature: domain Description: GIIM Note: maturase Location: 24699-24930 bp Feature: domain Description: GIIM Note: maturase Location: 24 699-24 930 bp Feature: gene Location: 25312-26346 bp Ori: EEF75596.1 Feature: domain Description: TraG-D_C Location: 25894-26224 bp Feature: domain Description: TraG-D_C Location: 25894 -26224 bp Feature: gene Location: 26677-27027 bp Ori: EEF75597.1 Gene: panD Feature: domain Description: PRK05449 Location: 26680-27013 bp Feature: domain Description: PRK054 4 9 Location: 26680-27013 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Relaxase (pfam03432), YWFCY (pfam14293), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), TraG-D_C (pfam12696), PRK05449 (aspartate alpha-decarboxylase; Provisional)

Seq: EQ973643.1 Bacteroides coprophilus DSM 18228 = JCM 13818 genomic scaffold Scfld15, whole genome shotgun sequence (763583 bp)
Overview 1 RT 1: 287716-291657 bp Neighborhood of RT #1 [287716, 291657] RVT-UG27 Feature: gene Location: 287716-288363 bp Feature: gene Location: 288377-289045 bp Feature: gene Location: 289038-290300 bp Ori: EEF76617.1 Feature: RT Description: RVT-UG27 Note: UG27 RT Location: 289230-289866 bp Feature: RT Description: RVT-UG27 Note: UG27 RT Location: 289230-289866 bp Feature: gene Location: 290478-290624 bp Feature: gene Location: 291178-291657 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG27