myRT

myRT report for GCA_000158335.2_Bact_dorei_5_1_36_D4_V2

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Seq: JH114326.1 Bacteroides dorei 5_1_36/D4 genomic scaffold supercont2.7, whole genome shotgun sequence (255994 bp)
Overview 1 RT 1: 92459-98873 bp Neighborhood of RT #1 [92459, 98873] RVT_N RVT-GII GIIM Feature: gene Location: 92459-92653 bp Feature: gene Location: 94309-94623 bp Feature: gene Location: 96574-98235 bp Feature: RT Description: RVT_N Location: 96628-96871 bp Feature: RT Description: RVT_N Location: 96628-96871 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 96916-97564 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9691 6-97564 bp Feature: domain Description: GIIM Note: maturase Location: 97615-97849 bp Feature: domain Description: GIIM Note: maturase Location: 9761 5-97849 bp Feature: gene Location: 98519-98710 bp Feature: gene Location: 98667-98873 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)

Seq: JH114320.1 Bacteroides dorei 5_1_36/D4 genomic scaffold supercont2.1, whole genome shotgun sequence (1003414 bp)
Overview 1 RT 1: 599261-605020 bp 2 RT 2: 624616-630529 bp Neighborhood of RT #1 [599261, 605358] DUF1896 N6_Mtase N6_Mtase COG4646 RVT-GII Intron_maturas2 Neighborhood of RT #2 [624616, 630990] Bac_Flav_CT_G RVT-GII Intron_maturas2 HNHc DUF3876 DUF4141 Feature: gene Location: 599261-599848 bp Feature: domain Description: DUF1896 Location: 599426-599846 bp Feature: domain Description: DUF1896 Location: 59942 6-599846 bp Feature: gene Location: 599838-603026 bp Feature: domain Description: N6_Mtase Location: 600150-600258 bp Feature: domain Description: N6_Mtase Location: 600150-6002 58 bp Feature: domain Description: N6_Mtase Location: 600396-600753 bp Feature: domain Description: N6_Mtase Location: 600396-600753 bp Feature: domain Description: COG4646 Location: 602112-603015 bp Feature: domain Description: COG4646 Location: 602 112 -603015 bp Feature: gene Location: 603556-605358 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 603820-604642 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 60382 0-604642 bp Feature: domain Description: Intron_maturas2 Location: 604801-605020 bp Feature: domain Description: Intron_maturas2 Location: 604801-60502 0 bp Feature: gene Location: 624616-624822 bp Feature: gene Location: 624705-627290 bp Feature: domain Description: Bac_Flav_CT_G Location: 624894-627282 bp Feature: domain Description: Bac_Flav_CT_G Location: 62 4894-62 72 82 bp Feature: gene Location: 627859-629682 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 628123-628945 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 62 812 3-62 8945 bp Feature: domain Description: Intron_maturas2 Location: 629119-629362 bp Feature: domain Description: Intron_maturas2 Location: 62 9119-62 9362 bp Feature: domain Description: HNHc Note: nucleases Location: 629473-629644 bp Feature: domain Description: HNHc Note: nucleases Location: 62 9473-62 9644 bp Feature: gene Location: 629947-630330 bp Feature: domain Description: DUF3876 Location: 630028-630292 bp Feature: domain Description: DUF3876 Location: 63002 8-6302 92 bp Feature: gene Location: 630361-630990 bp Feature: domain Description: DUF4141 Location: 630376-630529 bp Feature: domain Description: DUF4141 Location: 630376-63052 9 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF1896 (pfam08989), N6_Mtase (pfam02384), COG4646 (Adenine-specific DNA methylase, N12 class ), RVT-GII, Intron_maturas2 (pfam01348), Bac_Flav_CT_G (TIGR03783), HNHc (smart00507), DUF3876 (pfam12992), DUF4141 (pfam13605)