myRT

myRT report for GCA_000159355.1_ASM15935v1

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Seq: GG670120.1 Lactobacillus johnsonii ATCC 33200 genomic scaffold SCAFFOLD1, whole genome shotgun sequence (1030662 bp)
Overview 1 RT 1: 397043-399473 bp 2 RT 2: 402432-407556 bp Neighborhood of RT #1 [397043, 399473] DDE_Tnp_IS66 DDE_Tnp_IS66_C RVT-UG2 Neighborhood of RT #2 [402432, 407556] RmlD_sub_bind RVT-UG2 PRK04897 Feature: gene Location: 397043-397393 bp Ori: EEJ59773.1 Feature: domain Description: DDE_Tnp_IS66 Location: 397049-397223 bp Feature: domain Description: DDE_Tnp_IS66 Location: 397049-397223 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 397244-397364 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 397244-397364 bp Feature: gene Location: 397545-397757 bp Feature: gene Location: 397889-398869 bp Ori: EEJ59775.1 Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 398090-398852 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 398090-398852 bp Feature: gene Location: 398847-399191 bp Feature: gene Location: 399330-399473 bp Feature: gene Location: 402432-403073 bp Ori: EEJ59780.1 Gene: strL Feature: domain Description: RmlD_sub_bind Location: 402435-403035 bp Feature: domain Description: RmlD_sub_bind Location: 402435-403035 bp Feature: gene Location: 403221-403385 bp Feature: gene Location: 403556-404881 bp Ori: EEJ59782.1 Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 403757-404597 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 403757-404597 bp Feature: gene Location: 405259-406176 bp Ori: EEJ59783.1 Feature: domain Description: PRK04897 Location: 405262-406159 bp Feature: domain Description: PRK04897 Location: 405262-4061 59 bp Feature: gene Location: 407362-407556 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_IS66 (pfam03050), DDE_Tnp_IS66_C (pfam13817), RVT-UG2, RmlD_sub_bind (pfam04321), PRK04897 (heat shock protein HtpX; Provisional)