myRT

myRT report for GCA_000160495.1_ASM16049v1

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Seq: GG698596.1 Selenomonas sputigena ATCC 35185 genomic scaffold Scfld0, whole genome shotgun sequence (1120184 bp)
Overview 1 RT 1: 91816-95036 bp Neighborhood of RT #1 [91816, 95056] YqgFc YbjN RVT-GII RRM5_RBM12_like prismane_assoc Feature: gene Location: 91816-92238 bp Ori: EEX78513.1 Feature: domain Description: YqgFc Location: 91834-92080 bp Feature: domain Description: YqgFc Location: 91 834-92080 bp Feature: gene Location: 92231-92836 bp Ori: EEX78514.1 Feature: domain Description: YbjN Location: 92609-92798 bp Feature: domain Description: YbjN Location: 92609-92798 bp Feature: gene Location: 93066-94376 bp Ori: EEX78515.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 93450-94077 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 93450-94077 bp Feature: gene Location: 94373-94498 bp Ori: EEX78516.1 Feature: domain Description: RRM5_RBM12_like Location: 94391-94493 bp Feature: domain Description: RRM5_RBM1 2_like Location: 94391 -94493 bp Feature: gene Location: 94856-95056 bp Ori: EEX78517.1 Feature: domain Description: prismane_assoc Location: 94865-95036 bp Feature: domain Description: prismane_assoc Location: 94865-95036 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YqgFc (smart00732), YbjN (pfam10722), RVT-GII, RRM5_RBM12_like (cd12515), prismane_assoc (TIGR03980)

Seq: GG698597.1 Selenomonas sputigena ATCC 35185 genomic scaffold Scfld1, whole genome shotgun sequence (790339 bp)
Overview 1 RT 1: 187497-192130 bp Neighborhood of RT #1 [187497, 192130] SLATT_4 RVT-AbiA HEPN_AbiA_CTD Feature: gene Location: 187497-187616 bp Feature: gene Location: 188035-188328 bp Ori: EEX77226.1 Feature: domain Description: SLATT_4 Location: 188041-188296 bp Feature: domain Description: SLATT_4 Location: 188041-1882 96 bp Feature: gene Location: 188919-190451 bp Ori: EEX77227.1 Feature: RT Description: RVT-AbiA Note: AbiA RT Location: 188928-189423 bp Feature: RT Description: RVT-AbiA Note: AbiA RT Location: 18892 8-18942 3 bp Feature: domain Description: HEPN_AbiA_CTD Location: 190023-190416 bp Feature: domain Description: HEPN_AbiA_CTD Location: 19002 3-190416 bp Feature: gene Location: 190818-191759 bp Feature: gene Location: 191768-192130 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SLATT_4 (pfam18186), RVT-AbiA, HEPN_AbiA_CTD (pfam18732)