myRT

myRT report for GCA_000160535.1_ASM16053v1

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Seq: GG704787.1 Prevotella bergensis DSM 17361 genomic scaffold SCAFFOLD8, whole genome shotgun sequence (42688 bp)
Overview 1 RT 1: 2129-8783 bp Neighborhood of RT #1 [2129, 11578] RVT-DGRs Laminin_G_3 pfam08757 Feature: gene Location: 2129-2413 bp Feature: gene Location: 2406-2900 bp Feature: gene Location: 2900-4201 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 3110-3788 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 31 1 0-3788 bp Feature: gene Location: 4229-4570 bp Feature: gene Location: 4694-11578 bp Feature: domain Description: Laminin_G_3 Location: 7049-7475 bp Feature: domain Description: Laminin_G_3 Location: 7049-7475 bp Feature: domain Description: pfam08757 Location: 7736-8783 bp Feature: domain Description: pfam08757 Location: 7736-8783 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs, Laminin_G_3 (pfam13385), pfam08757 (CotH;CotH kinase protein)

Seq: GG704780.1 Prevotella bergensis DSM 17361 genomic scaffold SCAFFOLD1, whole genome shotgun sequence (1075652 bp)
Overview 1 RT 1: 647693-652538 bp Neighborhood of RT #1 [647693, 652538] HTH_17 RVT-GII GIIM DUF4972 ZnMc_astacin_like Feature: gene Location: 647693-648004 bp Feature: domain Description: HTH_17 Location: 647825-647972 bp Feature: domain Description: HTH_17 Location: 64782 5-647972 bp Feature: gene Location: 648350-648769 bp Feature: gene Location: 649544-650950 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 649886-650504 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 649886-650504 bp Feature: domain Description: GIIM Note: maturase Location: 650558-650768 bp Feature: domain Description: GIIM Note: maturase Location: 650558-650768 bp Feature: gene Location: 651134-652219 bp Feature: domain Description: DUF4972 Location: 651137-651332 bp Feature: domain Description: DUF4972 Location: 651137-651332 bp Feature: domain Description: ZnMc_astacin_like Location: 651530-652043 bp Feature: domain Description: ZnMc_astacin_like Location: 651530-652 043 bp Feature: gene Location: 652230-652538 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_17 (pfam12728), RVT-GII, GIIM (pfam08388), DUF4972 (pfam16342), ZnMc_astacin_like (cd04280)