myRT

myRT report for GCA_000160735.1_ASM16073v1

Download annotations/find similar RTs

Seq: CM000770.1 Rickettsia endosymbiont of Ixodes scapularis chromosome, whole genome shotgun sequence (1823326 bp)
Overview 1 RT 1: 281516-285237 bp 2 RT 2: 345138-352042 bp Neighborhood of RT #1 [281516, 285239] Transposase_mut IS285 RVT-GII GIIM DALR_1 Neighborhood of RT #2 [345138, 352047] ArgS RVT-GII GIIM SPOR parC_Gneg Feature: gene Location: 281516-282040 bp Feature: domain Description: Transposase_mut Location: 281561-282035 bp Feature: domain Description: Transposase_mut Location: 281 561 -282035 bp Feature: gene Location: 282109-282783 bp Feature: domain Description: IS285 Location: 282112-282733 bp Feature: domain Description: IS285 Location: 2821 1 2-282733 bp Feature: gene Location: 283024-284286 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 283243-283900 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 283243-283900 bp Feature: domain Description: GIIM Note: maturase Location: 283981-284200 bp Feature: domain Description: GIIM Note: maturase Location: 283981 -284200 bp Feature: gene Location: 284273-284470 bp Feature: gene Location: 284859-285239 bp Feature: domain Description: DALR_1 Location: 284865-285237 bp Feature: domain Description: DALR_1 Location: 284865-285237 bp Feature: gene Location: 345138-346868 bp Feature: domain Description: ArgS Location: 345141-346866 bp Feature: domain Description: ArgS Location: 3451 41 -346866 bp Feature: gene Location: 347257-347454 bp Feature: gene Location: 347441-348703 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 347660-348317 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 347660-34831 7 bp Feature: domain Description: GIIM Note: maturase Location: 348398-348617 bp Feature: domain Description: GIIM Note: maturase Location: 348398-34861 7 bp Feature: gene Location: 348957-349631 bp Feature: domain Description: SPOR Location: 349389-349623 bp Feature: domain Description: SPOR Location: 349389-349623 bp Feature: gene Location: 349831-352047 bp Feature: domain Description: parC_Gneg Location: 349849-352042 bp Feature: domain Description: parC_Gneg Location: 349849-352042 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Transposase_mut (pfam00872), IS285 (COG3328), RVT-GII, GIIM (pfam08388), DALR_1 (smart00836), ArgS (COG0018), SPOR (pfam05036), parC_Gneg (TIGR01062)

Seq: CM000772.1 Rickettsia endosymbiont of Ixodes scapularis plasmid pREIS2, complete sequence, whole genome shotgun sequence (66811 bp)
Overview 1 RT 1: 49721-56328 bp Neighborhood of RT #1 [49721, 56336] TraA_Ti TraA_Ti TraA_Ti RVT-GII GIIM RVT-GII TraD Feature: gene Location: 49721-51220 bp Feature: domain Description: TraA_Ti Location: 49829-50111 bp Feature: domain Description: TraA_Ti Location: 4982 9-50111 bp Feature: domain Description: TraA_Ti Location: 50327-50858 bp Feature: domain Description: TraA_Ti Location: 5032 7-50858 bp Feature: domain Description: TraA_Ti Location: 50999-51167 bp Feature: domain Description: TraA_Ti Location: 50999-51167 bp Feature: gene Location: 51941-52111 bp Feature: gene Location: 52476-53738 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 52695-53352 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 52 695-53352 bp Feature: domain Description: GIIM Note: maturase Location: 53433-53652 bp Feature: domain Description: GIIM Note: maturase Location: 53433-53652 bp Feature: gene Location: 53725-53922 bp Feature: gene Location: 54242-55015 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 54503-54998 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 54503-54998 bp Feature: gene Location: 55773-56087 bp Feature: gene Location: 56181-56336 bp Feature: domain Description: TraD Location: 56187-56328 bp Feature: domain Description: TraD Location: 56187-5632 8 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TraA_Ti (TIGR02768), RVT-GII, GIIM (pfam08388), TraD (pfam06412)