myRT

myRT report for GCA_000160955.1_ASM16095v1

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Seq: CM000718.1 Bacillus wiedmannii strain MM3 chromosome, whole genome shotgun sequence (5547057 bp)
Overview 1 RT 1: 869938-879399 bp 2 RT 2: 5252508-5259949 bp 3 RT 3: 5362922-5369484 bp Neighborhood of RT #1 [869938, 879399] dnd_assoc_2 DUF87 HATPase_c_3 RVT-UG2 Neighborhood of RT #2 [5252508, 5260011] ANK ANK RVT-GII HNHc tiny_TM_bacill ATP-synt_I Neighborhood of RT #3 [5362922, 5369492] INT_C_like_3 Beta-lactamase RVT_N RVT-GII GIIM RusA Feature: gene Location: 869938-874803 bp Ori: EEK69100.1 Feature: domain Description: dnd_assoc_2 Location: 869944-873562 bp Feature: domain Description: dnd_assoc_2 Location: 869944-873562 bp Feature: domain Description: DUF87 Location: 873748-874366 bp Feature: domain Description: DUF87 Location: 873748-874366 bp Feature: gene Location: 875315-876673 bp Ori: EEK69101.1 Feature: domain Description: HATPase_c_3 Location: 875348-875546 bp Feature: domain Description: HATPase_c_3 Location: 875348-875546 bp Feature: gene Location: 877158-878450 bp Ori: EEK69102.1 Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 877317-878154 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 87731 7-8781 54 bp Feature: gene Location: 879019-879144 bp Feature: gene Location: 879148-879399 bp Feature: gene Location: 5252508-5252828 bp Feature: gene Location: 5253417-5253914 bp Ori: EEK64586.1 Feature: domain Description: ANK Location: 5253444-5253627 bp Feature: domain Description: ANK Location: 5253444-5253627 bp Feature: domain Description: ANK Location: 5253633-5253897 bp Feature: domain Description: ANK Location: 5253633-5253897 bp Feature: gene Location: 5255635-5257557 bp Ori: EEK64580.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5256025-5256730 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5256025-5256730 bp Feature: domain Description: HNHc Note: nucleases Location: 5257309-5257441 bp Feature: domain Description: HNHc Note: nucleases Location: 5257309-5257441 bp Feature: gene Location: 5259509-5259646 bp Ori: EEK64574.1 Feature: domain Description: tiny_TM_bacill Location: 5259578-5259635 bp Feature: domain Description: tiny_TM_bacill Location: 5259578-5259635 bp Feature: gene Location: 5259769-5260011 bp Ori: EEK64575.1 Feature: domain Description: ATP-synt_I Location: 5259775-5259949 bp Feature: domain Description: ATP-synt_I Location: 5259775-5259949 bp Feature: gene Location: 5362922-5363527 bp Ori: EEK64490.1 Feature: domain Description: INT_C_like_3 Location: 5362931-5363291 bp Feature: domain Description: INT_C_like_3 Location: 5362931 -5363291 bp Feature: gene Location: 5364816-5365976 bp Ori: EEK64479.1 Feature: domain Description: Beta-lactamase Location: 5365002-5365938 bp Feature: domain Description: Beta-lactamase Location: 5365002-5365938 bp Feature: gene Location: 5367020-5368666 bp Ori: EEK64478.1 Feature: domain Description: RVT_N Location: 5367062-5367299 bp Feature: domain Description: RVT_N Location: 5367062-5367299 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5367353-5368013 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5367353-536801 3 bp Feature: domain Description: GIIM Note: maturase Location: 5368082-5368313 bp Feature: domain Description: GIIM Note: maturase Location: 5368082-536831 3 bp Feature: gene Location: 5368898-5369074 bp Feature: gene Location: 5369076-5369492 bp Ori: EEK64446.1 Feature: domain Description: RusA Location: 5369079-5369484 bp Feature: domain Description: RusA Location: 5369079-5369484 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT dnd_assoc_2 (TIGR03237), DUF87 (pfam01935), HATPase_c_3 (pfam13589), RVT-UG2, ANK (smart00248), RVT-GII, HNHc (smart00507), tiny_TM_bacill (TIGR01732), ATP-synt_I (pfam03899), INT_C_like_3 (cd01192)
Beta-lactamase (pfam00144), RVT_N (pfam13655), GIIM (pfam08388), RusA (pfam05866)