myRT

myRT report for GCA_000161375.1_ASM16137v1

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Seq: CM000739.1 Bacillus cereus AH1271 chromosome, whole genome shotgun sequence (5656704 bp)
Overview 1 RT 1: 5086357-5092596 bp 2 RT 2: 5229715-5236536 bp 3 RT 3: 5246945-5251234 bp 4 RT 4: 5521194-5526299 bp 5 RT 5: 5587737-5595553 bp Neighborhood of RT #1 [5086357, 5092596] LPD1 RVT-GII HNHc DUF3854 Neighborhood of RT #2 [5229715, 5236536] RVT_N RVT-GII GIIM HNH DEXHc_Snf DEXHc_Snf Neighborhood of RT #3 [5246945, 5251234] PRTRC_ThiF RVT-GII Intron_maturas2 HNHc E1_enzyme_family Neighborhood of RT #4 [5521194, 5526299] rve Tn7_Tnp_TnsA_C RVT-GII Intron_maturas2 HNHc Tn7_Tnp_TnsA_N Neighborhood of RT #5 [5587737, 5595553] RVT_N RVT-GII GIIM Feature: gene Location: 5086357-5088132 bp Feature: domain Description: LPD1 Location: 5087881-5088076 bp Feature: domain Description: LPD1 Location: 5087881 -5088076 bp Feature: gene Location: 5088275-5088652 bp Feature: gene Location: 5089388-5091271 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5089709-5090447 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5089709-5090447 bp Feature: domain Description: HNHc Note: nucleases Location: 5091005-5091152 bp Feature: domain Description: HNHc Note: nucleases Location: 5091 005-5091 1 52 bp Feature: gene Location: 5091373-5092278 bp Feature: domain Description: DUF3854 Location: 5091895-5092249 bp Feature: domain Description: DUF3854 Location: 5091 895-5092249 bp Feature: gene Location: 5092435-5092596 bp Feature: gene Location: 5229715-5230428 bp Feature: gene Location: 5230445-5231023 bp Feature: gene Location: 5231269-5233080 bp Feature: RT Description: RVT_N Location: 5231323-5231569 bp Feature: RT Description: RVT_N Location: 5231 323-5231 569 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5231623-5232277 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5231 623-5232277 bp Feature: domain Description: GIIM Note: maturase Location: 5232340-5232574 bp Feature: domain Description: GIIM Note: maturase Location: 5232340-5232574 bp Feature: domain Description: HNH Note: nucleases Location: 5232814-5232949 bp Feature: domain Description: HNH Note: nucleases Location: 523281 4-5232949 bp Feature: gene Location: 5233652-5236237 bp Feature: domain Description: DEXHc_Snf Location: 5234438-5234801 bp Feature: domain Description: DEXHc_Snf Location: 5234438-5234801 bp Feature: domain Description: DEXHc_Snf Location: 5235167-5235440 bp Feature: domain Description: DEXHc_Snf Location: 52351 67-5235440 bp Feature: gene Location: 5236309-5236536 bp Feature: gene Location: 5246945-5247316 bp Feature: gene Location: 5247336-5247878 bp Feature: domain Description: PRTRC_ThiF Location: 5247399-5247858 bp Feature: domain Description: PRTRC_ThiF Location: 5247399-5247858 bp Feature: gene Location: 5248130-5250070 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5248460-5249297 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5248460-5249297 bp Feature: domain Description: Intron_maturas2 Location: 5249435-5249726 bp Feature: domain Description: Intron_maturas2 Location: 5249435-5249726 bp Feature: domain Description: HNHc Note: nucleases Location: 5249858-5250017 bp Feature: domain Description: HNHc Note: nucleases Location: 5249858-525001 7 bp Feature: gene Location: 5250639-5250821 bp Feature: domain Description: E1_enzyme_family Location: 5250687-5250807 bp Feature: domain Description: E1 _enzyme_family Location: 5250687-5250807 bp Feature: gene Location: 5250824-5251234 bp Feature: gene Location: 5521194-5522657 bp Feature: domain Description: rve Location: 5522013-5522427 bp Feature: domain Description: rve Location: 552201 3-5522427 bp Feature: gene Location: 5522675-5522956 bp Feature: domain Description: Tn7_Tnp_TnsA_C Location: 5522699-5522876 bp Feature: domain Description: Tn7_Tnp_TnsA_C Location: 5522699-5522876 bp Feature: gene Location: 5523574-5525391 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5523838-5524669 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5523838-5524669 bp Feature: domain Description: Intron_maturas2 Location: 5524747-5525041 bp Feature: domain Description: Intron_maturas2 Location: 5524747-5525041 bp Feature: domain Description: HNHc Note: nucleases Location: 5525188-5525365 bp Feature: domain Description: HNHc Note: nucleases Location: 55251 88-5525365 bp Feature: gene Location: 5525457-5526062 bp Feature: domain Description: Tn7_Tnp_TnsA_N Location: 5525676-5525955 bp Feature: domain Description: Tn7_Tnp_TnsA_N Location: 5525676-5525955 bp Feature: gene Location: 5526174-5526299 bp Feature: gene Location: 5587737-5588537 bp Feature: gene Location: 5588598-5589392 bp Feature: gene Location: 5590223-5591869 bp Feature: RT Description: RVT_N Location: 5590265-5590502 bp Feature: RT Description: RVT_N Location: 5590265-5590502 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5590556-5591216 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5590556-5591 21 6 bp Feature: domain Description: GIIM Note: maturase Location: 5591285-5591516 bp Feature: domain Description: GIIM Note: maturase Location: 5591 285-5591 51 6 bp Feature: gene Location: 5592655-5593059 bp Feature: gene Location: 5593250-5595553 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT LPD1 (pfam18796), RVT-GII, HNHc (smart00507), DUF3854 (pfam12965), RVT_N (pfam13655), GIIM (pfam08388), HNH (pfam01844), DEXHc_Snf (cd17919), PRTRC_ThiF (TIGR03736), Intron_maturas2 (pfam01348)
E1_enzyme_family (cl22428), rve (pfam00665), Tn7_Tnp_TnsA_C (pfam08721), Tn7_Tnp_TnsA_N (pfam08722)