myRT

myRT report for GCA_000161575.1_ASM16157v1

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Seq: CM000751.1 Bacillus thuringiensis serovar kurstaki str. T03a001 chromosome, whole genome shotgun sequence (5527568 bp)
Overview 1 RT 1: 2115498-2121791 bp 2 RT 2: 5019893-5023565 bp 3 RT 3: 5489665-5495543 bp Neighborhood of RT #1 [2115498, 2121799] Lysozyme_like RVT-GII Intron_maturas2 HNHc RimL MgtE Neighborhood of RT #2 [5019893, 5023585] DUF4176 RVT-GII GIIM COG4824 Neighborhood of RT #3 [5489665, 5495560] DsbA_FrnE FrsA RVT-GII HNHc Doc Feature: gene Location: 2115498-2115632 bp Feature: gene Location: 2115853-2116434 bp Feature: domain Description: Lysozyme_like Location: 2115988-2116423 bp Feature: domain Description: Lysozyme_like Location: 21 1 5988-21 1 6423 bp Feature: gene Location: 2117010-2118833 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2117274-2118108 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 21 1 7274-21 1 81 08 bp Feature: domain Description: Intron_maturas2 Location: 2118177-2118516 bp Feature: domain Description: Intron_maturas2 Location: 21 1 81 77-21 1 851 6 bp Feature: domain Description: HNHc Note: nucleases Location: 2118654-2118810 bp Feature: domain Description: HNHc Note: nucleases Location: 21 1 8654-21 1 881 0 bp Feature: gene Location: 2119330-2119836 bp Feature: domain Description: RimL Location: 2119339-2119834 bp Feature: domain Description: RimL Location: 21 1 9339-21 1 9834 bp Feature: gene Location: 2120471-2121799 bp Feature: domain Description: MgtE Location: 2120486-2121791 bp Feature: domain Description: MgtE Location: 21 20486-21 21 791 bp Feature: gene Location: 5019893-5020027 bp Feature: gene Location: 5020176-5020307 bp Feature: domain Description: DUF4176 Location: 5020179-5020299 bp Feature: domain Description: DUF41 76 Location: 50201 79-5020299 bp Feature: gene Location: 5021281-5022285 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5021284-5021902 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5021 284-5021 902 bp Feature: domain Description: GIIM Note: maturase Location: 5021977-5022202 bp Feature: domain Description: GIIM Note: maturase Location: 5021 977-5022202 bp Feature: gene Location: 5022598-5022735 bp Feature: gene Location: 5023160-5023585 bp Feature: domain Description: COG4824 Location: 5023175-5023565 bp Feature: domain Description: COG4824 Location: 50231 75-5023565 bp Feature: gene Location: 5489665-5490330 bp Feature: domain Description: DsbA_FrnE Location: 5489671-5490217 bp Feature: domain Description: DsbA_FrnE Location: 5489671 -549021 7 bp Feature: gene Location: 5490596-5491498 bp Feature: domain Description: FrsA Location: 5490830-5491487 bp Feature: domain Description: FrsA Location: 5490830-5491 487 bp Feature: gene Location: 5492596-5494389 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5492878-5493574 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5492878-5493574 bp Feature: domain Description: HNHc Note: nucleases Location: 5494135-5494273 bp Feature: domain Description: HNHc Note: nucleases Location: 54941 35-5494273 bp Feature: gene Location: 5494716-5494997 bp Feature: gene Location: 5495159-5495560 bp Feature: domain Description: Doc Location: 5495174-5495543 bp Feature: domain Description: Doc Location: 54951 74-5495543 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Lysozyme_like (pfam13702), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), RimL (COG1670), MgtE (pfam01769), DUF4176 (pfam13780), GIIM (pfam08388), COG4824 (Phage-related holin (Lysis protein) ), DsbA_FrnE (cd03024)
FrsA (COG1073), Doc (COG3654)