myRT

myRT report for GCA_000162115.1_ASM16211v1

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Seq: GG705136.1 Acinetobacter radioresistens SH164 genomic scaffold supercont1.6, whole genome shotgun sequence (57971 bp)
Overview 1 RT 1: 9409-16033 bp Neighborhood of RT #1 [9409, 16083] Rep_3 DDE_Tnp_1_5 RVT-GII GIIM PHA02517 rve_2 RVT-G2L DUF4379 DUF4379 Feature: gene Location: 9409-10356 bp Ori: EEY85448.1 Feature: domain Description: Rep_3 Location: 9418-10084 bp Feature: domain Description: Rep_3 Location: 941 8-1 0084 bp Feature: gene Location: 10781-11392 bp Ori: EEY85449.1 Feature: domain Description: DDE_Tnp_1_5 Location: 10847-11171 bp Feature: domain Description: DDE_Tnp_1 _5 Location: 1 0847-1 1 1 71 bp Feature: gene Location: 11373-12011 bp Ori: EEY85450.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11391-11625 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 391 -1 1 625 bp Feature: domain Description: GIIM Note: maturase Location: 11703-11934 bp Feature: domain Description: GIIM Note: maturase Location: 1 1 703-1 1 934 bp Feature: gene Location: 12102-12419 bp Ori: EEY85451.1 Feature: domain Description: PHA02517 Location: 12105-12348 bp Feature: domain Description: PHA0251 7 Location: 1 21 05-1 2348 bp Feature: gene Location: 12416-12517 bp Ori: EEY85452.1 Feature: domain Description: rve_2 Location: 12419-12500 bp Feature: domain Description: rve_2 Location: 1 241 9-1 2500 bp Feature: gene Location: 12784-13326 bp Feature: gene Location: 13354-14550 bp Ori: EEY85454.1 Feature: RT Description: RVT-G2L Note: G2L RT Location: 13567-14236 bp Feature: RT Description: RVT-G2L Note: G2L RT Location: 1 3567-1 4236 bp Feature: gene Location: 14540-14845 bp Feature: gene Location: 15664-16083 bp Ori: EEY85456.1 Feature: domain Description: DUF4379 Location: 15745-15847 bp Feature: domain Description: DUF4379 Location: 1 5745-1 5847 bp Feature: domain Description: DUF4379 Location: 15958-16033 bp Feature: domain Description: DUF4379 Location: 1 5958-1 6033 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Rep_3 (pfam01051), DDE_Tnp_1_5 (pfam13737), RVT-GII, GIIM (pfam08388), PHA02517 (putative transposase OrfB; Reviewed), rve_2 (pfam13333), RVT-G2L, DUF4379 (pfam14311)