myRT

myRT report for GCA_000162175.1_ASM16217v1

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Seq: GG705149.1 Bacteroides sp. 2_1_33B genomic scaffold supercont1.1, whole genome shotgun sequence (1533097 bp)
Overview 1 RT 1: 751613-758691 bp Neighborhood of RT #1 [751613, 758828] dndB_like Arm-DNA-bind_5 Phage_int_SAM_5 INTN1_C_like RVT-GII Intron_maturas2 HNHc RteC HXXEE Feature: gene Location: 751613-752851 bp Feature: domain Description: dndB_like Location: 751715-752474 bp Feature: domain Description: dndB_like Location: 751 71 5-752474 bp Feature: gene Location: 753293-754315 bp Feature: domain Description: Arm-DNA-bind_5 Location: 753329-753590 bp Feature: domain Description: Arm-DNA-bind_5 Location: 753329-753590 bp Feature: domain Description: Phage_int_SAM_5 Location: 753632-753935 bp Feature: domain Description: Phage_int_SAM_5 Location: 753632-753935 bp Feature: domain Description: INTN1_C_like Location: 754010-754292 bp Feature: domain Description: INTN1 _C_like Location: 75401 0-754292 bp Feature: gene Location: 754857-756674 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 755121-755943 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7551 21 -755943 bp Feature: domain Description: Intron_maturas2 Location: 756018-756324 bp Feature: domain Description: Intron_maturas2 Location: 75601 8-756324 bp Feature: domain Description: HNHc Note: nucleases Location: 756501-756612 bp Feature: domain Description: HNHc Note: nucleases Location: 756501 -75661 2 bp Feature: gene Location: 757471-758316 bp Feature: domain Description: RteC Location: 757654-758311 bp Feature: domain Description: RteC Location: 757654-75831 1 bp Feature: gene Location: 758313-758828 bp Feature: domain Description: HXXEE Location: 758343-758691 bp Feature: domain Description: HXXEE Location: 758343-758691 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT dndB_like (cd16414), Arm-DNA-bind_5 (pfam17293), Phage_int_SAM_5 (pfam13102), INTN1_C_like (cd01185), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), RteC (pfam09357), HXXEE (pfam13787)