myRT

myRT report for GCA_000162195.1_ASM16219v1

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Seq: GG705227.1 Bacteroides sp. 3_1_33FAA genomic scaffold supercont1.1, whole genome shotgun sequence (1285869 bp)
Overview 1 RT 1: 651817-656261 bp Neighborhood of RT #1 [651817, 660382] RVT-DGRs Laminin_G_3 Laminin_G_3 Feature: gene Location: 651817-652059 bp Feature: gene Location: 652239-652724 bp Feature: gene Location: 652721-654025 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 652931-653609 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 652931 -653609 bp Feature: gene Location: 654430-654549 bp Feature: gene Location: 654542-660382 bp Feature: domain Description: Laminin_G_3 Location: 655106-655184 bp Feature: domain Description: Laminin_G_3 Location: 6551 06-6551 84 bp Feature: domain Description: Laminin_G_3 Location: 655835-656261 bp Feature: domain Description: Laminin_G_3 Location: 655835-656261 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs, Laminin_G_3 (pfam13385)

Seq: GG705234.1 Bacteroides sp. 3_1_33FAA genomic scaffold supercont1.8, whole genome shotgun sequence (226729 bp)
Overview 1 RT 1: 98324-103727 bp Neighborhood of RT #1 [98324, 103807] Bac_Flav_CT_N TraO RVT-GII Intron_maturas2 Toprim_2 DUF3872 Feature: gene Location: 98324-99310 bp Feature: domain Description: Bac_Flav_CT_N Location: 98456-99290 bp Feature: domain Description: Bac_Flav_CT_N Location: 98456-992 90 bp Feature: gene Location: 99321-99896 bp Feature: domain Description: TraO Location: 99396-99891 bp Feature: domain Description: TraO Location: 99396-99891 bp Feature: gene Location: 100646-102454 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 100910-101732 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 100910-101732 bp Feature: domain Description: Intron_maturas2 Location: 101801-102110 bp Feature: domain Description: Intron_maturas2 Location: 101801-102 110 bp Feature: gene Location: 102570-103289 bp Feature: domain Description: Toprim_2 Location: 102984-103236 bp Feature: domain Description: Toprim_2 Location: 102 984-1032 36 bp Feature: gene Location: 103289-103807 bp Feature: domain Description: DUF3872 Location: 103340-103727 bp Feature: domain Description: DUF3872 Location: 103340-10372 7 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), Toprim_2 (pfam13155), DUF3872 (pfam12988), Bac_Flav_CT_N (TIGR03780), TraO (pfam10626)