myRT

myRT report for GCA_000162915.1_ASM16291v1

Download annotations/find similar RTs

Seq: GG703892.1 Prevotella oris F0302 genomic scaffold Scfld9, whole genome shotgun sequence (24444 bp)
Overview 1 RT 1: 2190-8802 bp Neighborhood of RT #1 [2190, 8867] AbiEii RVT_N RVT-GII Phage_int_SAM_5 INTN1_C_like Feature: gene Location: 2190-3257 bp Feature: domain Description: AbiEii Location: 2316-2895 bp Feature: domain Description: AbiEii Location: 231 6-2895 bp Feature: gene Location: 4555-4929 bp Feature: gene Location: 5089-6264 bp Feature: RT Description: RVT_N Location: 5149-5392 bp Feature: RT Description: RVT_N Location: 51 49-5392 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5437-6085 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5437-6085 bp Feature: gene Location: 6917-7333 bp Feature: gene Location: 7647-8867 bp Feature: domain Description: Phage_int_SAM_5 Location: 7980-8274 bp Feature: domain Description: Phage_int_SAM_5 Location: 7980-8274 bp Feature: domain Description: INTN1_C_like Location: 8331-8802 bp Feature: domain Description: INTN1 _C_like Location: 8331 -8802 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AbiEii (pfam08843), RVT_N (pfam13655), RVT-GII, Phage_int_SAM_5 (pfam13102), INTN1_C_like (cd01185)

Seq: GG703883.1 Prevotella oris F0302 genomic scaffold Scfld0, whole genome shotgun sequence (846130 bp)
Overview 1 RT 1: 663271-675062 bp Neighborhood of RT #1 [663271, 675136] DUF1896 N6_Mtase COG4646 RVT_N RVT-GII RVT_N RVT-GII GIIM PRK13351 PRK13351 Feature: gene Location: 663271-663723 bp Feature: domain Description: DUF1896 Location: 663301-663721 bp Feature: domain Description: DUF1896 Location: 663301-66372 1 bp Feature: gene Location: 663713-668383 bp Feature: domain Description: N6_Mtase Location: 664025-664631 bp Feature: domain Description: N6_Mtase Location: 66402 5-664631 bp Feature: domain Description: COG4646 Location: 665717-668000 bp Feature: domain Description: COG4646 Location: 665717-668000 bp Feature: gene Location: 669036-669557 bp Feature: RT Description: RVT_N Location: 669096-669339 bp Feature: RT Description: RVT_N Location: 669096-669339 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 669384-669528 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 669384-66952 8 bp Feature: gene Location: 669661-671286 bp Feature: RT Description: RVT_N Location: 669670-669913 bp Feature: RT Description: RVT_N Location: 669670-669913 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 669958-670606 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 669958-670606 bp Feature: domain Description: GIIM Note: maturase Location: 670660-670891 bp Feature: domain Description: GIIM Note: maturase Location: 670660-670891 bp Feature: gene Location: 672641-672802 bp Feature: gene Location: 673211-675136 bp Feature: domain Description: PRK13351 Location: 673214-673679 bp Feature: domain Description: PRK13351 Location: 6732 14-673679 bp Feature: domain Description: PRK13351 Location: 673727-675062 bp Feature: domain Description: PRK13351 Location: 67372 7-675062 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF1896 (pfam08989), N6_Mtase (pfam02384), COG4646 (Adenine-specific DNA methylase, N12 class ), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), PRK13351 (elongation factor G-like protein)