myRT

myRT report for GCA_000164215.1_ASM16421v1

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Seq: GG771698.1 Escherichia coli MS 84-1 genomic scaffold Scfld1348, whole genome shotgun sequence (75710 bp)
Overview 1 RT 1: 51209-55091 bp Neighborhood of RT #1 [51209, 55096] dut slmA RVT-Retrons pyrE rph Feature: gene Location: 51209-51667 bp Feature: domain Description: dut Location: 51215-51662 bp Feature: domain Description: dut Location: 51 21 5-51 662 bp Feature: gene Location: 51774-52370 bp Feature: domain Description: slmA Location: 51780-52356 bp Feature: domain Description: slmA Location: 51 780-52356 bp Feature: gene Location: 52416-53375 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 52551-53100 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 52551 -531 00 bp Feature: gene Location: 53673-54329 bp Feature: domain Description: pyrE Location: 53691-54324 bp Feature: domain Description: pyrE Location: 53691 -54324 bp Feature: gene Location: 54380-55096 bp Feature: domain Description: rph Location: 54383-55091 bp Feature: domain Description: rph Location: 54383-55091 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT dut (TIGR00576), slmA (PRK09480), RVT-Retrons, pyrE (TIGR00336), rph (PRK00173)

Seq: GG771560.1 Escherichia coli MS 84-1 genomic scaffold Scfld116, whole genome shotgun sequence (14229 bp)
Overview 1 RT 1: 11400-13922 bp Neighborhood of RT #1 [11400, 13922] PHA02517 RVT-GII GIIM Feature: gene Location: 11400-11600 bp Feature: gene Location: 11697-11867 bp Feature: domain Description: PHA02517 Location: 11700-11832 bp Feature: domain Description: PHA02 517 Location: 11700-11832 bp Feature: gene Location: 12020-13528 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12278-13010 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12 2 78-13010 bp Feature: domain Description: GIIM Note: maturase Location: 13085-13283 bp Feature: domain Description: GIIM Note: maturase Location: 13085-132 83 bp Feature: gene Location: 13497-13922 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388)