myRT

myRT report for GCA_000164475.1_ASM16447v1

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Seq: GG773421.1 Escherichia coli MS 116-1 genomic scaffold Scfld426, whole genome shotgun sequence (18106 bp)
Overview 1 RT 1: 1491-4364 bp Neighborhood of RT #1 [1491, 4364] RVT-GII Feature: gene Location: 1491-1701 bp Feature: gene Location: 1712-2090 bp Feature: gene Location: 2416-3579 bp Ori: EFK15514.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2530-3217 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2530-321 7 bp Feature: gene Location: 3566-3874 bp Feature: gene Location: 4239-4364 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: GG773461.1 Escherichia coli MS 116-1 genomic scaffold Scfld797, whole genome shotgun sequence (112612 bp)
Overview 1 RT 1: 217-4040 bp Neighborhood of RT #1 [217, 4040] PRK09692 Arm-DNA-bind_3 RVT-Retrons Feature: gene Location: 217-768 bp Ori: EFK14078.1 Feature: domain Description: PRK09692 Location: 223-766 bp Feature: domain Description: PRK09692 Location: 2 2 3-766 bp Feature: gene Location: 828-1130 bp Ori: EFK14079.1 Feature: domain Description: Arm-DNA-bind_3 Location: 837-1089 bp Feature: domain Description: Arm-DNA-bind_3 Location: 837-1089 bp Feature: gene Location: 1585-2517 bp Ori: EFK14080.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1687-2281 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1687-2 2 81 bp Feature: gene Location: 2519-3487 bp Feature: gene Location: 3891-4040 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK09692 (Integrase; provisional), Arm-DNA-bind_3 (pfam13356), RVT-Retrons

Seq: GG773443.1 Escherichia coli MS 116-1 genomic scaffold Scfld578, whole genome shotgun sequence (32973 bp)
Overview 1 RT 1: 14186-18339 bp Neighborhood of RT #1 [14186, 18347] RVT-GII RVT-GII GIIM YesM Feature: gene Location: 14186-14888 bp Feature: gene Location: 14862-15149 bp Feature: gene Location: 15447-15986 bp Ori: EFK14780.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 15777-15855 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 15777-15855 bp Feature: gene Location: 16014-16535 bp Ori: EFK14781.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 16020-16302 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 16020-163 02 bp Feature: domain Description: GIIM Note: maturase Location: 16350-16530 bp Feature: domain Description: GIIM Note: maturase Location: 163 50-1653 0 bp Feature: gene Location: 16739-17050 bp Feature: gene Location: 17085-18347 bp Ori: EFK14783.1 Feature: domain Description: YesM Location: 17598-18339 bp Feature: domain Description: YesM Location: 17598-183 3 9 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), YesM (COG2972)

Seq: GG773349.1 Escherichia coli MS 116-1 genomic scaffold Scfld31, whole genome shotgun sequence (2272 bp)
Overview 1 RT 1: 93-1995 bp Neighborhood of RT #1 [93, 1995] RVT-GII GIIM Feature: gene Location: 93-1601 bp Ori: EFK17533.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 351-1083 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 351-1083 bp Feature: domain Description: GIIM Note: maturase Location: 1158-1356 bp Feature: domain Description: GIIM Note: maturase Location: 1158-1356 bp Feature: gene Location: 1570-1995 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)