myRT

myRT report for GCA_000164595.1_ASM16459v1

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Seq: GG774351.1 Escherichia coli MS 60-1 genomic scaffold Scfld374, whole genome shotgun sequence (46389 bp)
Overview 1 RT 1: 43550-45730 bp Neighborhood of RT #1 [43550, 46383] HTH_29 HTH_33 DDE_3 RVT-AbiP2 Feature: gene Location: 43550-43840 bp Feature: gene Location: 43850-44911 bp Ori: EGB82914.1 Feature: domain Description: HTH_29 Location: 43970-44141 bp Feature: domain Description: HTH_29 Location: 43970-441 41 bp Feature: domain Description: HTH_33 Location: 44174-44336 bp Feature: domain Description: HTH_33 Location: 441 74-44336 bp Feature: domain Description: DDE_3 Location: 44378-44807 bp Feature: domain Description: DDE_3 Location: 44378-44807 bp Feature: gene Location: 45013-46383 bp Ori: EGB82915.1 Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 45274-45730 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 45274-45730 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_29 (pfam13551), HTH_33 (pfam13592), DDE_3 (pfam13358), RVT-AbiP2

Seq: GG774297.1 Escherichia coli MS 60-1 genomic scaffold Scfld96, whole genome shotgun sequence (21230 bp)
Overview 1 RT 1: 16742-19798 bp Neighborhood of RT #1 [16742, 19836] RVT-GII GIIM PHA02517 InsE Feature: gene Location: 16742-17137 bp Feature: gene Location: 17028-17453 bp Feature: gene Location: 17422-18930 bp Ori: EGB84664.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 17680-18412 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 17680-18412 bp Feature: domain Description: GIIM Note: maturase Location: 18487-18685 bp Feature: domain Description: GIIM Note: maturase Location: 18487-18685 bp Feature: gene Location: 19047-19403 bp Ori: EGB84666.1 Feature: domain Description: PHA02517 Location: 19050-19359 bp Feature: domain Description: PHA02 517 Location: 19050-19359 bp Feature: gene Location: 19432-19836 bp Ori: EGB84667.1 Feature: domain Description: InsE Location: 19462-19798 bp Feature: domain Description: InsE Location: 19462 -19798 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), PHA02517 (putative transposase OrfB; Reviewed), InsE (COG2963)