myRT

myRT report for GCA_000167195.1_ASM16719v1

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Seq: AADV02000027.1 Crocosphaera watsonii WH 8501 ctg330, whole genome shotgun sequence (32297 bp)
Overview 1 RT 1: 22677-28421 bp Neighborhood of RT #1 [22677, 28468] fkbM_fam Methyltransf_24 RVT_N RVT-GII GIIM HNH MhpC Feature: gene Location: 22677-23549 bp Ori: EAM50419.1 Feature: domain Description: fkbM_fam Location: 22980-23430 bp Feature: domain Description: fkbM_fam Location: 22980-23430 bp Feature: gene Location: 23647-24732 bp Ori: EAM50418.1 Feature: domain Description: Methyltransf_24 Location: 24193-24493 bp Feature: domain Description: Methyltransf_24 Location: 241 93-24493 bp Feature: gene Location: 24870-26660 bp Ori: EAM50417.1 Feature: domain Description: RVT_N Location: 24909-25155 bp Feature: domain Description: RVT_N Location: 24909-251 55 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 25200-25893 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 25200-25893 bp Feature: domain Description: GIIM Note: maturase Location: 26007-26235 bp Feature: domain Description: GIIM Note: maturase Location: 26007-26235 bp Feature: domain Description: HNH Note: nucleases Location: 26445-26577 bp Feature: domain Description: HNH Note: nucleases Location: 26445-26577 bp Feature: gene Location: 27273-27596 bp Feature: gene Location: 27725-28468 bp Ori: EAM50415.1 Feature: domain Description: MhpC Location: 27890-28421 bp Feature: domain Description: MhpC Location: 27890-28421 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT fkbM_fam (TIGR01444), Methyltransf_24 (pfam13578), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNH (pfam01844), MhpC (COG0596)

Seq: AADV02000056.1 Crocosphaera watsonii WH 8501 ctg325, whole genome shotgun sequence (22205 bp)
Overview 1 RT 1: 6619-11920 bp 2 RT 2: 17905-22047 bp Neighborhood of RT #1 [6619, 12432] PRK15056 PsaA RVT_N RVT-GII RVT-GII GIIM McrA DUF772 Neighborhood of RT #2 [17905, 22130] TPR DDE_Tnp_1_4 RVT-GII GIIM HNH Feature: gene Location: 6619-7380 bp Ori: EAM49709.1 Feature: domain Description: PRK15056 Location: 6637-7351 bp Feature: domain Description: PRK15056 Location: 6637-7351 bp Feature: gene Location: 7550-8524 bp Ori: EAM49708.1 Feature: domain Description: PsaA Location: 7679-8501 bp Feature: domain Description: PsaA Location: 7679-8501 bp Feature: gene Location: 9442-10863 bp Ori: EAM49697.1 Feature: domain Description: RVT_N Location: 9448-9634 bp Feature: domain Description: RVT_N Location: 9448-9634 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9682-10108 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9682 -10108 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10108-10276 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10108-102 76 bp Feature: domain Description: GIIM Note: maturase Location: 10333-10492 bp Feature: domain Description: GIIM Note: maturase Location: 10333-10492 bp Feature: domain Description: McrA Location: 10558-10831 bp Feature: domain Description: McrA Location: 10558-10831 bp Feature: gene Location: 10997-11368 bp Feature: gene Location: 11545-12432 bp Ori: EAM49699.1 Feature: domain Description: DUF772 Location: 11707-11920 bp Feature: domain Description: DUF772 Location: 11707-1192 0 bp Feature: gene Location: 17905-18417 bp Ori: EAM49705.1 Feature: domain Description: TPR Location: 18082-18346 bp Feature: domain Description: TPR Location: 18082 -18346 bp Feature: gene Location: 18785-20269 bp Ori: EAM49704.1 Feature: domain Description: DDE_Tnp_1_4 Location: 18830-20258 bp Feature: domain Description: DDE_Tnp_1_4 Location: 18830-2 02 58 bp Feature: gene Location: 20715-22130 bp Ori: EAM49703.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 20718-21363 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 0718-2 1363 bp Feature: domain Description: GIIM Note: maturase Location: 21477-21705 bp Feature: domain Description: GIIM Note: maturase Location: 2 1477-2 1705 bp Feature: domain Description: HNH Note: nucleases Location: 21915-22047 bp Feature: domain Description: HNH Note: nucleases Location: 2 1915-2 2 047 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK15056 (manganese/iron ABC transporter ATP-binding protein), PsaA (cd01137), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), McrA (COG4058), DUF772 (pfam05598), TPR (smart00028), DDE_Tnp_1_4 (pfam13701), HNH (pfam01844)

Seq: AADV02000076.1 Crocosphaera watsonii WH 8501 ctg288, whole genome shotgun sequence (17373 bp)
Overview 1 RT 1: 8587-14598 bp Neighborhood of RT #1 [8587, 14612] NdhM Ppa RVT_N RVT-GII RVT-GII GIIM McrA DltE LptF_LptG Feature: gene Location: 8587-8946 bp Ori: EAM49340.1 Feature: domain Description: NdhM Location: 8596-8911 bp Feature: domain Description: NdhM Location: 8596-8911 bp Feature: gene Location: 9071-9481 bp Ori: EAM49339.1 Feature: domain Description: Ppa Location: 9077-9470 bp Feature: domain Description: Ppa Location: 9077-9470 bp Feature: gene Location: 9574-11085 bp Ori: EAM49338.1 Feature: domain Description: RVT_N Location: 9610-9856 bp Feature: domain Description: RVT_N Location: 9610-9856 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9904-10330 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9904-103 3 0 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10330-10498 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 103 3 0-10498 bp Feature: domain Description: GIIM Note: maturase Location: 10555-10714 bp Feature: domain Description: GIIM Note: maturase Location: 10555-10714 bp Feature: domain Description: McrA Location: 10753-11053 bp Feature: domain Description: McrA Location: 10753 -11053 bp Feature: gene Location: 12535-13320 bp Ori: EAM49337.1 Feature: domain Description: DltE Location: 12544-13315 bp Feature: domain Description: DltE Location: 12544-13 3 15 bp Feature: gene Location: 13410-14612 bp Ori: EAM49333.1 Feature: domain Description: LptF_LptG Location: 13506-14598 bp Feature: domain Description: LptF_LptG Location: 13 506-14598 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT NdhM (pfam10664), Ppa (COG0221), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), McrA (COG4058), DltE (COG3967), LptF_LptG

Seq: AADV02000095.1 Crocosphaera watsonii WH 8501 ctg249, whole genome shotgun sequence (14642 bp)
Overview 1 RT 1: 1-7529 bp Neighborhood of RT #1 [1, 7585] RVT_N RVT-GII GIIM HNH dCache_1 TMAO_torS PAS_3 TMAO_torS HTH_23 HTH_32 Feature: gene Location: 1-493 bp Feature: gene Location: 1005-2795 bp Ori: EAM49059.1 Feature: domain Description: RVT_N Location: 1044-1290 bp Feature: domain Description: RVT_N Location: 104 4 -1290 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1335-2028 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1335-2028 bp Feature: domain Description: GIIM Note: maturase Location: 2142-2370 bp Feature: domain Description: GIIM Note: maturase Location: 214 2-2370 bp Feature: domain Description: HNH Note: nucleases Location: 2580-2712 bp Feature: domain Description: HNH Note: nucleases Location: 2580-2712 bp Feature: gene Location: 3360-6494 bp Ori: EAM49058.1 Feature: domain Description: dCache_1 Location: 3951-4668 bp Feature: domain Description: dCache_1 Location: 3951-4 668 bp Feature: domain Description: TMAO_torS Location: 4938-5058 bp Feature: domain Description: TMAO_torS Location: 4 938-5058 bp Feature: domain Description: PAS_3 Location: 5160-5424 bp Feature: domain Description: PAS_3 Location: 5160-54 24 bp Feature: domain Description: TMAO_torS Location: 5436-6447 bp Feature: domain Description: TMAO_torS Location: 54 36-64 4 7 bp Feature: gene Location: 7004-7585 bp Ori: EAM49051.1 Feature: domain Description: HTH_23 Location: 7136-7256 bp Feature: domain Description: HTH_23 Location: 7136-7256 bp Feature: domain Description: HTH_32 Location: 7334-7529 bp Feature: domain Description: HTH_32 Location: 7334 -7529 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNH (pfam01844), dCache_1 (pfam02743), TMAO_torS (TIGR02956), PAS_3 (pfam08447), HTH_23 (pfam13384), HTH_32 (pfam13565)

Seq: AADV02000317.1 Crocosphaera watsonii WH 8501 ctg75, whole genome shotgun sequence (2104 bp)
Overview 1 RT 1: 24-1901 bp Neighborhood of RT #1 [24, 2104] GT4-like RVT_N RVT-GII RVT-GII Feature: gene Location: 24-200 bp Ori: EAM47453.1 Feature: domain Description: GT4-like Location: 27-177 bp Feature: domain Description: GT4-like Location: 27-177 bp Feature: gene Location: 871-1374 bp Ori: EAM47451.1 Feature: domain Description: RVT_N Location: 910-1156 bp Feature: domain Description: RVT_N Location: 910-115 6 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1201-1363 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1201-1363 bp Feature: gene Location: 1325-2104 bp Ori: EAM47452.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1355-1901 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 135 5 -1901 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT GT4-like (cd05844), RVT_N (pfam13655), RVT-GII

Seq: AADV02000062.1 Crocosphaera watsonii WH 8501 ctg318, whole genome shotgun sequence (20063 bp)
Overview 1 RT 1: 1-5798 bp Neighborhood of RT #1 [1, 5815] FhaB FhaB RVT_N RVT-GII GIIM McrA FhaB Haemagg_act Feature: gene Location: 1-1154 bp Feature: gene Location: 1351-2856 bp Ori: EAM49600.1 Feature: domain Description: FhaB Location: 1438-2383 bp Feature: domain Description: FhaB Location: 1438-2383 bp Feature: domain Description: FhaB Location: 2446-2752 bp Feature: domain Description: FhaB Location: 2446 -2752 bp Feature: gene Location: 2979-4493 bp Ori: EAM49599.1 Feature: domain Description: RVT_N Location: 3018-3264 bp Feature: domain Description: RVT_N Location: 3018-326 4 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3312-3906 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3312-3906 bp Feature: domain Description: GIIM Note: maturase Location: 3963-4080 bp Feature: domain Description: GIIM Note: maturase Location: 396 3-4080 bp Feature: domain Description: McrA Location: 4182-4461 bp Feature: domain Description: McrA Location: 4182-446 1 bp Feature: gene Location: 5022-5450 bp Ori: EAM49598.1 Feature: domain Description: FhaB Location: 5106-5409 bp Feature: domain Description: FhaB Location: 5106 -5409 bp Feature: gene Location: 5447-5815 bp Ori: EAM49597.1 Feature: domain Description: Haemagg_act Location: 5543-5798 bp Feature: domain Description: Haemagg_act Location: 5543-5798 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT FhaB (COG3210), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), McrA (COG4058), Haemagg_act (smart00912)

Seq: AADV02000021.1 Crocosphaera watsonii WH 8501 ctg337, whole genome shotgun sequence (34344 bp)
Overview 1 RT 1: 3672-9356 bp Neighborhood of RT #1 [3672, 9412] NhaP PBP1_ABC_ligand_binding_like_11 RVT_N RVT-GII RVT-GII GIIM McrA DDE_3 HTH_23 HTH_32 Feature: gene Location: 3672-4862 bp Ori: EAM50602.1 Feature: domain Description: NhaP Location: 3705-4848 bp Feature: domain Description: NhaP Location: 37 05-4848 bp Feature: gene Location: 4929-6251 bp Ori: EAM50631.1 Feature: domain Description: PBP1_ABC_ligand_binding_like_11 Location: 5094-6198 bp Feature: domain Description: PBP1_ABC_ligand_binding_like_11 Location: 5094-6198 bp Feature: gene Location: 6713-8128 bp Ori: EAM50630.1 Feature: domain Description: RVT_N Location: 6746-6899 bp Feature: domain Description: RVT_N Location: 67 46-6899 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6947-7373 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6947 -7 37 3 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7373-7541 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7 37 3-7 541 bp Feature: domain Description: GIIM Note: maturase Location: 7598-7721 bp Feature: domain Description: GIIM Note: maturase Location: 7 598-7 7 21 bp Feature: domain Description: McrA Location: 7814-8096 bp Feature: domain Description: McrA Location: 7 814-8096 bp Feature: gene Location: 8125-8766 bp Ori: EAM50629.1 Feature: domain Description: DDE_3 Location: 8149-8674 bp Feature: domain Description: DDE_3 Location: 8149-867 4 bp Feature: gene Location: 8831-9412 bp Ori: EAM50628.1 Feature: domain Description: HTH_23 Location: 8963-9083 bp Feature: domain Description: HTH_23 Location: 8963-9083 bp Feature: domain Description: HTH_32 Location: 9161-9356 bp Feature: domain Description: HTH_32 Location: 9161-9356 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT NhaP (COG0025), PBP1_ABC_ligand_binding_like_11, RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), McrA (COG4058), DDE_3 (pfam13358), HTH_23 (pfam13384), HTH_32 (pfam13565)

Seq: AADV02000032.1 Crocosphaera watsonii WH 8501 ctg326, whole genome shotgun sequence (29475 bp)
Overview 1 RT 1: 13823-20464 bp Neighborhood of RT #1 [13823, 20610] TPR_1 TPR_1 TPR_1 TPR_1 NB-ARC RVT-GII GIIM HNH PRK07369 S2P-M50_like_2 Feature: gene Location: 13823-15106 bp Ori: EAM50269.1 Feature: domain Description: TPR_1 Location: 14663-14759 bp Feature: domain Description: TPR_1 Location: 14663-14759 bp Feature: domain Description: TPR_1 Location: 14762-14858 bp Feature: domain Description: TPR_1 Location: 14762-148 58 bp Feature: domain Description: TPR_1 Location: 14867-14963 bp Feature: domain Description: TPR_1 Location: 148 67-14963 bp Feature: domain Description: TPR_1 Location: 14969-15065 bp Feature: domain Description: TPR_1 Location: 14969-15065 bp Feature: gene Location: 15360-15962 bp Ori: EAM50268.1 Feature: domain Description: NB-ARC Location: 15654-15906 bp Feature: domain Description: NB-ARC Location: 15654-15906 bp Feature: gene Location: 15887-17212 bp Ori: EAM50256.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 15923-16496 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 15923-16496 bp Feature: domain Description: GIIM Note: maturase Location: 16610-16838 bp Feature: domain Description: GIIM Note: maturase Location: 16610-168 38 bp Feature: domain Description: HNH Note: nucleases Location: 17048-17183 bp Feature: domain Description: HNH Note: nucleases Location: 17048 -1718 3 bp Feature: gene Location: 17730-18989 bp Ori: EAM50257.1 Feature: domain Description: PRK07369 Location: 17751-18984 bp Feature: domain Description: PRK07369 Location: 17751-18 98 4 bp Feature: gene Location: 19111-20610 bp Ori: EAM50267.1 Feature: domain Description: S2P-M50_like_2 Location: 19753-20464 bp Feature: domain Description: S2P-M50_like_2 Location: 19753-20464 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TPR_1 (pfam00515), NB-ARC (pfam00931), RVT-GII, GIIM (pfam08388), HNH (pfam01844), PRK07369 (dihydroorotase; Provisional), S2P-M50_like_2 (cd06160)

Seq: AADV02000129.1 Crocosphaera watsonii WH 8501 ctg268, whole genome shotgun sequence (12148 bp)
Overview 1 RT 1: 85-3135 bp Neighborhood of RT #1 [85, 3135] DUF772 RVT_N RVT-GII COG5421 Feature: gene Location: 85-714 bp Ori: EAM48618.1 Feature: domain Description: DUF772 Location: 247-460 bp Feature: domain Description: DUF772 Location: 247-460 bp Feature: gene Location: 840-1400 bp Ori: EAM48617.1 Feature: domain Description: RVT_N Location: 924-1170 bp Feature: domain Description: RVT_N Location: 9 24-1170 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1218-1392 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1218-139 2 bp Feature: gene Location: 1511-2884 bp Ori: EAM48604.1 Feature: domain Description: COG5421 Location: 1541-2879 bp Feature: domain Description: COG5421 Location: 1541-2879 bp Feature: gene Location: 2884-3135 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF772 (pfam05598), RVT_N (pfam13655), RVT-GII, COG5421 (Transposase )

Seq: AADV02000002.1 Crocosphaera watsonii WH 8501 ctg361, whole genome shotgun sequence (710623 bp)
Overview 1 RT 1: 8004-14212 bp 2 RT 2: 242140-248008 bp 3 RT 3: 333976-339929 bp Neighborhood of RT #1 [8004, 14217] PulA RVT_N RVT-GII GIIM HNH HNH PRK13250 Neighborhood of RT #2 [242140, 248013] D5_N DDE_Tnp_1_4 RVT_N RVT-GII RVT-GII GIIM McrA FlhG DDE_3 Neighborhood of RT #3 [333976, 339973] rpmI RVT_N RVT-GII GIIM HNH LC_FACS_like Feature: gene Location: 8004-10121 bp Ori: EAM52045.1 Feature: domain Description: PulA Location: 8025-10107 bp Feature: domain Description: PulA Location: 8025-10 10 7 bp Feature: gene Location: 10149-10433 bp Feature: gene Location: 11004-12788 bp Ori: EAM52047.1 Feature: domain Description: RVT_N Location: 11043-11289 bp Feature: domain Description: RVT_N Location: 110 43-11289 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11334-12027 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11334-12027 bp Feature: domain Description: GIIM Note: maturase Location: 12135-12363 bp Feature: domain Description: GIIM Note: maturase Location: 12135-12363 bp Feature: domain Description: HNH Note: nucleases Location: 12573-12708 bp Feature: domain Description: HNH Note: nucleases Location: 12573-12708 bp Feature: gene Location: 13173-13304 bp Ori: EAM52048.1 Feature: domain Description: HNH Note: nucleases Location: 13179-13272 bp Feature: domain Description: HNH Note: nucleases Location: 13179-13272 bp Feature: gene Location: 13477-14217 bp Ori: EAM52049.1 Feature: domain Description: PRK13250 Location: 13480-14212 bp Feature: domain Description: PRK13250 Location: 13480-14212 bp Feature: gene Location: 242140-243042 bp Ori: EAM52266.1 Feature: domain Description: D5_N Location: 242317-242674 bp Feature: domain Description: D5_N Location: 242317-242674 bp Feature: gene Location: 243193-244677 bp Ori: EAM52267.1 Feature: domain Description: DDE_Tnp_1_4 Location: 243238-244666 bp Feature: domain Description: DDE_Tnp_1_4 Location: 243238-244666 bp Feature: gene Location: 245010-246602 bp Ori: EAM52268.1 Feature: domain Description: RVT_N Location: 245127-245373 bp Feature: domain Description: RVT_N Location: 245127-245373 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 245421-245844 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 245421-245844 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 245847-246015 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 245847-246015 bp Feature: domain Description: GIIM Note: maturase Location: 246072-246264 bp Feature: domain Description: GIIM Note: maturase Location: 246072-246264 bp Feature: domain Description: McrA Location: 246288-246570 bp Feature: domain Description: McrA Location: 246288-246570 bp Feature: gene Location: 246872-247354 bp Ori: EAM52269.1 Feature: domain Description: FlhG Location: 246875-247343 bp Feature: domain Description: FlhG Location: 246875-247343 bp Feature: gene Location: 247525-248013 bp Ori: EAM52270.1 Feature: domain Description: DDE_3 Location: 247549-248008 bp Feature: domain Description: DDE_3 Location: 247549-248008 bp Feature: gene Location: 333976-334203 bp Ori: EAM52355.1 Feature: domain Description: rpmI Location: 334003-334201 bp Feature: domain Description: rpmI Location: 334003-334201 bp Feature: gene Location: 334292-334933 bp Feature: gene Location: 336148-337164 bp Ori: EAM52357.1 Feature: domain Description: RVT_N Location: 336187-336433 bp Feature: domain Description: RVT_N Location: 336187-336433 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 336478-337162 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 336478-337162 bp Feature: gene Location: 337309-337953 bp Ori: EAM52358.1 Feature: domain Description: GIIM Note: maturase Location: 337315-337528 bp Feature: domain Description: GIIM Note: maturase Location: 337315-337528 bp Feature: domain Description: HNH Note: nucleases Location: 337738-337867 bp Feature: domain Description: HNH Note: nucleases Location: 337738-337867 bp Feature: gene Location: 338057-339973 bp Ori: EAM52359.1 Feature: domain Description: LC_FACS_like Location: 338168-339929 bp Feature: domain Description: LC_FACS_like Location: 338168-339929 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PulA (COG1523), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNH (pfam01844), PRK13250 (phycoerythrobilin:ferredoxin oxidoreductase; Provisional), D5_N (smart00885), DDE_Tnp_1_4 (pfam13701), McrA (COG4058), FlhG (COG0455)
DDE_3 (pfam13358), rpmI (PRK00172), LC_FACS_like (cd17640)

Seq: AADV02000025.1 Crocosphaera watsonii WH 8501 ctg352, whole genome shotgun sequence (32719 bp)
Overview 1 RT 1: 768-2956 bp Neighborhood of RT #1 [768, 3114] RVT_N RVT-GII AtpF Feature: gene Location: 768-1304 bp Ori: EAM50468.1 Feature: domain Description: RVT_N Location: 771-981 bp Feature: domain Description: RVT_N Location: 771-981 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1026-1293 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1026-1293 bp Feature: gene Location: 1768-2175 bp Feature: gene Location: 2446-3114 bp Ori: EAM50494.1 Feature: domain Description: AtpF Location: 2671-2956 bp Feature: domain Description: AtpF Location: 2671-2956 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, AtpF (COG0711)

Seq: AADV02000041.1 Crocosphaera watsonii WH 8501 ctg331, whole genome shotgun sequence (24925 bp)
Overview 1 RT 1: 568-5379 bp Neighborhood of RT #1 [568, 5435] TPR TPR_2 PRK12275 RVT_N RVT-GII GIIM McrA COP23 HTH_23 HTH_32 Feature: gene Location: 568-1236 bp Ori: EAM50055.1 Feature: domain Description: TPR Location: 781-1021 bp Feature: domain Description: TPR Location: 781-1021 bp Feature: domain Description: TPR_2 Location: 1072-1159 bp Feature: domain Description: TPR_2 Location: 1072-1159 bp Feature: gene Location: 1301-1723 bp Ori: EAM50054.1 Feature: domain Description: PRK12275 Location: 1376-1718 bp Feature: domain Description: PRK12 275 Location: 1376-1718 bp Feature: gene Location: 1875-3467 bp Ori: EAM50053.1 Feature: domain Description: RVT_N Location: 1992-2238 bp Feature: domain Description: RVT_N Location: 1992-2238 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2286-2880 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2286-2880 bp Feature: domain Description: GIIM Note: maturase Location: 2937-3066 bp Feature: domain Description: GIIM Note: maturase Location: 2937-3066 bp Feature: domain Description: McrA Location: 3156-3435 bp Feature: domain Description: McrA Location: 3156-3435 bp Feature: gene Location: 4120-4755 bp Ori: EAM50052.1 Feature: domain Description: COP23 Location: 4246-4702 bp Feature: domain Description: COP23 Location: 4246-4702 bp Feature: gene Location: 4854-5435 bp Ori: EAM50037.1 Feature: domain Description: HTH_23 Location: 4986-5106 bp Feature: domain Description: HTH_23 Location: 4986-5106 bp Feature: domain Description: HTH_32 Location: 5184-5379 bp Feature: domain Description: HTH_32 Location: 5184-5379 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TPR (smart00028), TPR_2 (pfam07719), PRK12275 (hypothetical protein; Reviewed), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), McrA (COG4058), COP23 (pfam14218), HTH_23 (pfam13384), HTH_32 (pfam13565)

Seq: AADV02000033.1 Crocosphaera watsonii WH 8501 ctg311, whole genome shotgun sequence (27017 bp)
Overview 1 RT 1: 3660-7694 bp Neighborhood of RT #1 [3660, 7702] NP_MTAN-like PotA RVT-GII RVT-GII GIIM McrA CheW LON Feature: gene Location: 3660-4397 bp Ori: EAM50253.1 Feature: domain Description: NP_MTAN-like Location: 3876-4290 bp Feature: domain Description: NP_MTAN-like Location: 3876-4290 bp Feature: gene Location: 4438-5502 bp Ori: EAM50229.1 Feature: domain Description: PotA Location: 4459-5485 bp Feature: domain Description: PotA Location: 4459-5485 bp Feature: gene Location: 5679-6596 bp Ori: EAM50252.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5685-5835 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5685-5835 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5841-6009 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5841-6009 bp Feature: domain Description: GIIM Note: maturase Location: 6066-6195 bp Feature: domain Description: GIIM Note: maturase Location: 6066-6195 bp Feature: domain Description: McrA Location: 6285-6564 bp Feature: domain Description: McrA Location: 6285-6564 bp Feature: gene Location: 6651-6929 bp Ori: EAM50230.1 Feature: domain Description: CheW Location: 6654-6915 bp Feature: domain Description: CheW Location: 6654-6915 bp Feature: gene Location: 7064-7702 bp Ori: EAM50231.1 Feature: domain Description: LON Location: 7073-7694 bp Feature: domain Description: LON Location: 7073-7694 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT NP_MTAN-like (cd17877), PotA (COG3842), RVT-GII, GIIM (pfam08388), McrA (COG4058), CheW (smart00260), LON (smart00464)

Seq: AADV02000007.1 Crocosphaera watsonii WH 8501 ctg356, whole genome shotgun sequence (65471 bp)
Overview 1 RT 1: 18252-23720 bp Neighborhood of RT #1 [18252, 23731] PRK09330 RVT_N RVT-GII GIIM HNH HicB Feature: gene Location: 18252-19511 bp Ori: EAM51192.1 Feature: domain Description: PRK09330 Location: 18435-19410 bp Feature: domain Description: PRK09330 Location: 18435-19410 bp Feature: gene Location: 20277-20441 bp Feature: gene Location: 20554-22290 bp Ori: EAM51190.1 Feature: domain Description: RVT_N Location: 20593-20839 bp Feature: domain Description: RVT_N Location: 20593-20839 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 20884-21580 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 20884-21580 bp Feature: domain Description: GIIM Note: maturase Location: 21688-21916 bp Feature: domain Description: GIIM Note: maturase Location: 21688-21916 bp Feature: domain Description: HNH Note: nucleases Location: 22126-22261 bp Feature: domain Description: HNH Note: nucleases Location: 22126-22261 bp Feature: gene Location: 23126-23251 bp Feature: gene Location: 23552-23731 bp Ori: EAM51150.1 Feature: domain Description: HicB Location: 23570-23720 bp Feature: domain Description: HicB Location: 23570-23720 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK09330 (cell division protein FtsZ; Validated), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNH (pfam01844), HicB (pfam05534)

Seq: AADV02000042.1 Crocosphaera watsonii WH 8501 ctg328, whole genome shotgun sequence (24362 bp)
Overview 1 RT 1: 16746-21716 bp Neighborhood of RT #1 [16746, 21716] RhaT HU RVT_N RVT-GII GIIM Feature: gene Location: 16746-17495 bp Ori: EAM50029.1 Feature: domain Description: RhaT Location: 16791-17487 bp Feature: domain Description: RhaT Location: 16791-17487 bp Feature: gene Location: 17774-17938 bp Ori: EAM50030.1 Feature: domain Description: HU Location: 17780-17927 bp Feature: domain Description: HU Location: 17780-17927 bp Feature: gene Location: 18526-19983 bp Ori: EAM50031.1 Feature: domain Description: RVT_N Location: 18628-18871 bp Feature: domain Description: RVT_N Location: 18628-18871 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 18946-19552 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 18946-19552 bp Feature: domain Description: GIIM Note: maturase Location: 19654-19849 bp Feature: domain Description: GIIM Note: maturase Location: 19654-19849 bp Feature: gene Location: 20634-20942 bp Feature: gene Location: 21372-21716 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RhaT (TIGR00776), HU (cd13831), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)

Seq: AADV02000001.1 Crocosphaera watsonii WH 8501 ctg362, whole genome shotgun sequence (720107 bp)
Overview 1 RT 1: 42312-46750 bp 2 RT 2: 410360-419051 bp Neighborhood of RT #1 [42312, 46842] S15_bact STKc_PknB_like RVT-GII GIIM McrA DUF772 DDE_Tnp_1_2 DDE_3 Neighborhood of RT #2 [410360, 419051] PRK05942 amt RVT_N RVT-GII GIIM HNH TonB_C Feature: gene Location: 42312-42614 bp Ori: EAM52758.1 Feature: domain Description: S15_bact Location: 42360-42612 bp Feature: domain Description: S15_bact Location: 42360-42612 bp Feature: gene Location: 42749-43345 bp Ori: EAM52759.1 Feature: domain Description: STKc_PknB_like Location: 42848-43340 bp Feature: domain Description: STKc_PknB_like Location: 42848-43340 bp Feature: gene Location: 43430-44470 bp Ori: EAM52760.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 43454-43883 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 43454-43883 bp Feature: domain Description: GIIM Note: maturase Location: 43940-44063 bp Feature: domain Description: GIIM Note: maturase Location: 43940-44063 bp Feature: domain Description: McrA Location: 44156-44438 bp Feature: domain Description: McrA Location: 44156-44438 bp Feature: gene Location: 44474-46000 bp Ori: EAM52761.1 Feature: domain Description: DUF772 Location: 44636-44849 bp Feature: domain Description: DUF772 Location: 44636-44849 bp Feature: domain Description: DDE_Tnp_1_2 Location: 45566-45833 bp Feature: domain Description: DDE_Tnp_1_2 Location: 45566-45833 bp Feature: gene Location: 46201-46842 bp Ori: EAM52762.1 Feature: domain Description: DDE_3 Location: 46225-46750 bp Feature: domain Description: DDE_3 Location: 46225-46750 bp Feature: gene Location: 410360-411544 bp Ori: EAM53112.1 Feature: domain Description: PRK05942 Location: 410363-411542 bp Feature: domain Description: PRK05942 Location: 410363-411542 bp Feature: gene Location: 411677-413167 bp Ori: EAM53113.1 Feature: domain Description: amt Location: 411893-413081 bp Feature: domain Description: amt Location: 411893-413081 bp Feature: gene Location: 414254-416008 bp Ori: EAM53114.1 Feature: domain Description: RVT_N Location: 414293-414539 bp Feature: domain Description: RVT_N Location: 414293-414539 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 414590-415277 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 414590-415277 bp Feature: domain Description: GIIM Note: maturase Location: 415406-415634 bp Feature: domain Description: GIIM Note: maturase Location: 415406-415634 bp Feature: domain Description: HNH Note: nucleases Location: 415844-415979 bp Feature: domain Description: HNH Note: nucleases Location: 415844-415979 bp Feature: gene Location: 416716-418356 bp Ori: EAM53115.1 Feature: domain Description: TonB_C Location: 417562-417733 bp Feature: domain Description: TonB_C Location: 417562-417733 bp Feature: gene Location: 418710-419051 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT S15_bact (TIGR00952), STKc_PknB_like (cd14014), RVT-GII, GIIM (pfam08388), McrA (COG4058), DUF772 (pfam05598), DDE_Tnp_1_2 (pfam13586), DDE_3 (pfam13358), PRK05942 (aspartate aminotransferase; Provisional), amt (TIGR00836)
RVT_N (pfam13655), HNH (pfam01844), TonB_C (pfam03544)

Seq: AADV02000215.1 Crocosphaera watsonii WH 8501 ctg139, whole genome shotgun sequence (6163 bp)
Overview 1 RT 1: 3088-5835 bp Neighborhood of RT #1 [3088, 5867] DDE_3 fatty_acyltransferase_like RVT-GII GIIM McrA Feature: gene Location: 3088-3690 bp Ori: EAM47859.1 Feature: domain Description: DDE_3 Location: 3136-3598 bp Feature: domain Description: DDE_3 Location: 3136-3598 bp Feature: gene Location: 3883-4821 bp Ori: EAM47861.1 Feature: domain Description: fatty_acyltransferase_like Location: 3982-4738 bp Feature: domain Description: fatty_acyltransferase_like Location: 3982-4738 bp Feature: gene Location: 5160-5867 bp Ori: EAM47860.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5169-5280 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5169-5280 bp Feature: domain Description: GIIM Note: maturase Location: 5337-5454 bp Feature: domain Description: GIIM Note: maturase Location: 5337-5454 bp Feature: domain Description: McrA Location: 5553-5835 bp Feature: domain Description: McrA Location: 5553-5835 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_3 (pfam13358), fatty_acyltransferase_like (cd01846), RVT-GII, GIIM (pfam08388), McrA (COG4058)

Seq: AADV02000005.1 Crocosphaera watsonii WH 8501 ctg358, whole genome shotgun sequence (198057 bp)
Overview 1 RT 1: 18257-23505 bp 2 RT 2: 118015-123137 bp Neighborhood of RT #1 [18257, 23633] LigD_PE_dom COG5421 RVT_N RVT-GII GT1_Gtf-like DDE_Tnp_1 Neighborhood of RT #2 [118015, 123148] TIGR03792 PRK01202 RVT_N RVT-GII GIIM HNH HybF PRK10463 Feature: gene Location: 18257-18580 bp Ori: EAM51510.1 Feature: domain Description: LigD_PE_dom Location: 18263-18560 bp Feature: domain Description: LigD_PE_dom Location: 18 263-18 560 bp Feature: gene Location: 18777-20339 bp Ori: EAM51348.1 Feature: domain Description: COG5421 Location: 18807-20316 bp Feature: domain Description: COG5421 Location: 18 807-20316 bp Feature: gene Location: 20619-21236 bp Ori: EAM51509.1 Feature: domain Description: RVT_N Location: 20736-20982 bp Feature: domain Description: RVT_N Location: 20736-20982 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 21030-21216 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 21030-21216 bp Feature: gene Location: 21889-22302 bp Ori: EAM51508.1 Feature: domain Description: GT1_Gtf-like Location: 21892-22255 bp Feature: domain Description: GT1_Gtf-like Location: 218 92-22255 bp Feature: gene Location: 23040-23633 bp Ori: EAM51507.1 Feature: domain Description: DDE_Tnp_1 Location: 23058-23505 bp Feature: domain Description: DDE_Tnp_1 Location: 23058-23505 bp Feature: gene Location: 118015-118326 bp Ori: EAM51473.1 Feature: domain Description: TIGR03792 Location: 118021-118288 bp Feature: domain Description: TIGR03792 Location: 118 021-118 288 bp Feature: gene Location: 118882-119280 bp Ori: EAM51472.1 Feature: domain Description: PRK01202 Location: 118894-119266 bp Feature: domain Description: PRK01202 Location: 118 894-119266 bp Feature: gene Location: 119416-121200 bp Ori: EAM51471.1 Feature: domain Description: RVT_N Location: 119455-119701 bp Feature: domain Description: RVT_N Location: 119455-119701 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 119746-120439 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 119746-120439 bp Feature: domain Description: GIIM Note: maturase Location: 120547-120769 bp Feature: domain Description: GIIM Note: maturase Location: 120547-120769 bp Feature: domain Description: HNH Note: nucleases Location: 120985-121117 bp Feature: domain Description: HNH Note: nucleases Location: 120985-121117 bp Feature: gene Location: 121980-122324 bp Ori: EAM51400.1 Feature: domain Description: HybF Location: 121983-122313 bp Feature: domain Description: HybF Location: 121983-122313 bp Feature: gene Location: 122315-123148 bp Ori: EAM51401.1 Feature: domain Description: PRK10463 Location: 122318-123137 bp Feature: domain Description: PRK10463 Location: 122318 -123137 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT LigD_PE_dom (TIGR02777), COG5421 (Transposase ), RVT_N (pfam13655), RVT-GII, GT1_Gtf-like (cd03784), DDE_Tnp_1 (pfam01609), TIGR03792 (uncharacterized cyanobacterial protein, TIGR03792 family), PRK01202 (glycine cleavage system protein GcvH), GIIM (pfam08388), HNH (pfam01844)
HybF (COG0375), PRK10463 (hydrogenase nickel incorporation protein HypB; Provisional)

Seq: AADV02000074.1 Crocosphaera watsonii WH 8501 ctg284, whole genome shotgun sequence (17640 bp)
Overview 1 RT 1: 12960-17331 bp Neighborhood of RT #1 [12960, 17402] InsQ InsQ RVT_N RVT-GII DDE_3 DUF772 Feature: gene Location: 12960-14147 bp Ori: EAM49372.1 Feature: domain Description: InsQ Location: 12966-14079 bp Feature: domain Description: InsQ Location: 12966-14079 bp Feature: gene Location: 14228-14695 bp Ori: EAM49368.1 Feature: domain Description: InsQ Location: 14339-14687 bp Feature: domain Description: InsQ Location: 14339-14687 bp Feature: gene Location: 15300-16469 bp Ori: EAM49369.1 Feature: domain Description: RVT_N Location: 15339-15585 bp Feature: domain Description: RVT_N Location: 15339-15585 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 15630-16323 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 15630-16323 bp Feature: gene Location: 16453-16740 bp Ori: EAM49371.1 Feature: domain Description: DDE_3 Location: 16507-16648 bp Feature: domain Description: DDE_3 Location: 16507-16648 bp Feature: gene Location: 16956-17402 bp Ori: EAM49370.1 Feature: domain Description: DUF772 Location: 17118-17331 bp Feature: domain Description: DUF772 Location: 17118-17331 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsQ (COG0675), RVT_N (pfam13655), RVT-GII, DDE_3 (pfam13358), DUF772 (pfam05598)

Seq: AADV02000004.1 Crocosphaera watsonii WH 8501 ctg359, whole genome shotgun sequence (225009 bp)
Overview 1 RT 1: 36664-48364 bp 2 RT 2: 85406-90162 bp Neighborhood of RT #1 [36664, 48366] SlyX zf-IS66 DDE_Tnp_IS66 DUF3854 COG3378 RVT_N RVT-GII GIIM DUF772 DDE_Tnp_1_2 Uma2 Neighborhood of RT #2 [85406, 90164] GdhA RVT_N RVT-GII GIIM HNH PRK00347 PRK11880 Feature: gene Location: 36664-38160 bp Ori: EAM51540.1 Feature: domain Description: SlyX Location: 36769-36898 bp Feature: domain Description: SlyX Location: 36769-36898 bp Feature: domain Description: zf-IS66 Location: 37054-37189 bp Feature: domain Description: zf-IS66 Location: 37054-37189 bp Feature: domain Description: DDE_Tnp_IS66 Location: 37237-38041 bp Feature: domain Description: DDE_Tnp_IS66 Location: 37237-38041 bp Feature: gene Location: 39753-42794 bp Ori: EAM51541.1 Feature: domain Description: DUF3854 Location: 40248-40611 bp Feature: domain Description: DUF3854 Location: 40248-40611 bp Feature: domain Description: COG3378 Location: 41028-42063 bp Feature: domain Description: COG3378 Location: 41028-420 63 bp Feature: gene Location: 43616-45163 bp Ori: EAM51542.1 Feature: domain Description: RVT_N Location: 43655-43901 bp Feature: domain Description: RVT_N Location: 43655-43901 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 43946-44636 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 43946-44636 bp Feature: domain Description: GIIM Note: maturase Location: 44762-44990 bp Feature: domain Description: GIIM Note: maturase Location: 44762-44990 bp Feature: gene Location: 45727-47253 bp Ori: EAM51697.1 Feature: domain Description: DUF772 Location: 45889-46102 bp Feature: domain Description: DUF772 Location: 45889-46102 bp Feature: domain Description: DDE_Tnp_1_2 Location: 46819-47086 bp Feature: domain Description: DDE_Tnp_1_2 Location: 46819-47086 bp Feature: gene Location: 47710-48366 bp Ori: EAM51696.1 Feature: domain Description: Uma2 Location: 47812-48364 bp Feature: domain Description: Uma2 Location: 47812-48364 bp Feature: gene Location: 85406-86410 bp Ori: EAM51566.1 Feature: domain Description: GdhA Location: 85409-86405 bp Feature: domain Description: GdhA Location: 85409-86405 bp Feature: gene Location: 87015-87311 bp Ori: EAM51567.1 Feature: domain Description: RVT_N Location: 87054-87285 bp Feature: domain Description: RVT_N Location: 87054-87285 bp Feature: gene Location: 87292-88431 bp Ori: EAM51568.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 87295-87664 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 87295-87664 bp Feature: domain Description: GIIM Note: maturase Location: 87778-88006 bp Feature: domain Description: GIIM Note: maturase Location: 87778-88006 bp Feature: domain Description: HNH Note: nucleases Location: 88216-88348 bp Feature: domain Description: HNH Note: nucleases Location: 88216-88348 bp Feature: gene Location: 88658-89380 bp Ori: EAM51680.1 Feature: domain Description: PRK00347 Location: 88682-89372 bp Feature: domain Description: PRK00347 Location: 88682-89372 bp Feature: gene Location: 89394-90164 bp Ori: EAM51679.1 Feature: domain Description: PRK11880 Location: 89397-90162 bp Feature: domain Description: PRK11880 Location: 89397-90162 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SlyX (pfam04102), zf-IS66 (pfam13005), DDE_Tnp_IS66 (pfam03050), DUF3854 (pfam12965), COG3378 (Phage- or plasmid-associated DNA primase ), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), DUF772 (pfam05598), DDE_Tnp_1_2 (pfam13586)
Uma2 (pfam05685), GdhA (COG0334), HNH (pfam01844), PRK00347 (DNA/RNA nuclease SfsA), PRK11880 (pyrroline-5-carboxylate reductase; Reviewed)

Seq: AADV02000003.1 Crocosphaera watsonii WH 8501 ctg360, whole genome shotgun sequence (347519 bp)
Overview 1 RT 1: 22380-27347 bp 2 RT 2: 75041-81008 bp 3 RT 3: 277114-290111 bp 4 RT 4: 335520-340877 bp Neighborhood of RT #1 [22380, 27347] DDE_3 HTH_23 HTH_32 RVT-GII GIIM HNH DUF772 DDE_Tnp_1_2 Neighborhood of RT #2 [75041, 81136] COG4446 Uma2 RVT_N RVT-GII GIIM HNH carb_red_sniffer_like_SDR_c VirB8 sigma70-ECF Neighborhood of RT #3 [277114, 290128] mraY LSm16_N H_lectin LSm16_N H_lectin LSm16_N H_lectin RVT_N RVT-GII GIIM McrA CAAD QueD QueD QueD YkfC RVT-GII GIIM NrdF cyano_PEP Neighborhood of RT #4 [335520, 340912] M3A_DCP HNH RVT-GII DDE_Tnp_ISAZ013 DDE_Tnp_ISAZ013 Feature: gene Location: 22380-23021 bp Ori: EAM51733.1 Feature: domain Description: DDE_3 Location: 22404-22929 bp Feature: domain Description: DDE_3 Location: 22404-22929 bp Feature: gene Location: 23086-23667 bp Ori: EAM51734.1 Feature: domain Description: HTH_23 Location: 23218-23338 bp Feature: domain Description: HTH_23 Location: 2321 8-23338 bp Feature: domain Description: HTH_32 Location: 23416-23611 bp Feature: domain Description: HTH_32 Location: 23416-23611 bp Feature: gene Location: 23621-25231 bp Ori: EAM51735.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 23777-24470 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 23777-24470 bp Feature: domain Description: GIIM Note: maturase Location: 24578-24806 bp Feature: domain Description: GIIM Note: maturase Location: 24578-24806 bp Feature: domain Description: HNH Note: nucleases Location: 25016-25151 bp Feature: domain Description: HNH Note: nucleases Location: 25016-25151 bp Feature: gene Location: 25425-26873 bp Ori: EAM51736.1 Feature: domain Description: DUF772 Location: 25587-25800 bp Feature: domain Description: DUF772 Location: 25587-25800 bp Feature: domain Description: DDE_Tnp_1_2 Location: 26517-26784 bp Feature: domain Description: DDE_Tnp_1_2 Location: 26517-26784 bp Feature: gene Location: 27015-27347 bp Feature: gene Location: 75041-75427 bp Ori: EAM51777.1 Feature: domain Description: COG4446 Location: 75053-75416 bp Feature: domain Description: COG4446 Location: 75053-75416 bp Feature: gene Location: 75719-76405 bp Ori: EAM51778.1 Feature: domain Description: Uma2 Location: 75824-76298 bp Feature: domain Description: Uma2 Location: 75824-76298 bp Feature: gene Location: 76666-78456 bp Ori: EAM51779.1 Feature: domain Description: RVT_N Location: 76705-76951 bp Feature: domain Description: RVT_N Location: 76705-76951 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 76996-77689 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 76996-77689 bp Feature: domain Description: GIIM Note: maturase Location: 77803-78031 bp Feature: domain Description: GIIM Note: maturase Location: 77803-78031 bp Feature: domain Description: HNH Note: nucleases Location: 78241-78373 bp Feature: domain Description: HNH Note: nucleases Location: 78241-78373 bp Feature: gene Location: 79021-79662 bp Ori: EAM51780.1 Feature: domain Description: carb_red_sniffer_like_SDR_c Location: 79033-79618 bp Feature: domain Description: carb_red_sniffer_like_SDR_c Location: 79033-79618 bp Feature: gene Location: 80276-81136 bp Ori: EAM51781.1 Feature: domain Description: VirB8 Location: 80333-80579 bp Feature: domain Description: VirB8 Location: 80333-80579 bp Feature: domain Description: sigma70-ECF Location: 80648-81008 bp Feature: domain Description: sigma70-ECF Location: 80648-81008 bp Feature: gene Location: 277114-278217 bp Ori: EAM51968.1 Feature: domain Description: mraY Location: 277303-278209 bp Feature: domain Description: mraY Location: 277303-278209 bp Feature: gene Location: 278286-281495 bp Ori: EAM51969.1 Feature: domain Description: LSm16_N Location: 278685-278751 bp Feature: domain Description: LSm16_N Location: 278685-278751 bp Feature: domain Description: H_lectin Location: 278982-279171 bp Feature: domain Description: H_lectin Location: 278982-279171 bp Feature: domain Description: LSm16_N Location: 279525-279591 bp Feature: domain Description: LSm16_N Location: 279525-279591 bp Feature: domain Description: H_lectin Location: 279822-280008 bp Feature: domain Description: H_lectin Location: 279822-280008 bp Feature: domain Description: LSm16_N Location: 280368-280434 bp Feature: domain Description: LSm16_N Location: 280368-280434 bp Feature: domain Description: H_lectin Location: 280674-280806 bp Feature: domain Description: H_lectin Location: 280674-280806 bp Feature: gene Location: 281717-283309 bp Ori: EAM51970.1 Feature: domain Description: RVT_N Location: 281834-282080 bp Feature: domain Description: RVT_N Location: 281834-282080 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 282128-282722 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2821 28-282722 bp Feature: domain Description: GIIM Note: maturase Location: 282779-282896 bp Feature: domain Description: GIIM Note: maturase Location: 282779-282896 bp Feature: domain Description: McrA Location: 282998-283277 bp Feature: domain Description: McrA Location: 282998-283277 bp Feature: gene Location: 284024-284440 bp Ori: EAM51971.1 Feature: domain Description: CAAD Location: 284177-284429 bp Feature: domain Description: CAAD Location: 284177-284429 bp Feature: gene Location: 284643-285518 bp Ori: EAM51972.1 Feature: domain Description: QueD Location: 284646-285015 bp Feature: domain Description: QueD Location: 284646-285015 bp Feature: domain Description: QueD Location: 285045-285375 bp Feature: domain Description: QueD Location: 285045-285375 bp Feature: domain Description: QueD Location: 285393-285450 bp Feature: domain Description: QueD Location: 285393-285450 bp Feature: gene Location: 285856-285978 bp Feature: gene Location: 286758-288227 bp Ori: EAM51974.1 Feature: domain Description: YkfC Location: 286800-286968 bp Feature: domain Description: YkfC Location: 286800-286968 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 287016-287670 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 287016-287670 bp Feature: domain Description: GIIM Note: maturase Location: 287772-288000 bp Feature: domain Description: GIIM Note: maturase Location: 287772-288000 bp Feature: gene Location: 288320-289285 bp Ori: EAM51975.1 Feature: domain Description: NrdF Location: 288347-289274 bp Feature: domain Description: NrdF Location: 288347-289274 bp Feature: gene Location: 289400-290128 bp Ori: EAM51976.1 Feature: domain Description: cyano_PEP Location: 290039-290111 bp Feature: domain Description: cyano_PEP Location: 290039-290111 bp Feature: gene Location: 335520-337604 bp Ori: EAM52027.1 Feature: domain Description: M3A_DCP Location: 335598-337590 bp Feature: domain Description: M3A_DCP Location: 335598-337590 bp Feature: gene Location: 337847-338344 bp Ori: EAM52028.1 Feature: domain Description: HNH Note: nucleases Location: 338129-338264 bp Feature: domain Description: HNH Note: nucleases Location: 338129-338264 bp Feature: gene Location: 338605-339255 bp Ori: EAM52029.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 338608-339205 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 338608-339205 bp Feature: gene Location: 339742-340191 bp Ori: EAM52030.1 Feature: domain Description: DDE_Tnp_ISAZ013 Location: 339748-340186 bp Feature: domain Description: DDE_Tnp_ISAZ013 Location: 339748-340186 bp Feature: gene Location: 340406-340912 bp Ori: EAM52031.1 Feature: domain Description: DDE_Tnp_ISAZ013 Location: 340658-340877 bp Feature: domain Description: DDE_Tnp_ISAZ013 Location: 340658-340877 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_3 (pfam13358), HTH_23 (pfam13384), HTH_32 (pfam13565), RVT-GII, GIIM (pfam08388), HNH (pfam01844), DUF772 (pfam05598), DDE_Tnp_1_2 (pfam13586), COG4446 (Uncharacterized conserved protein, DUF1499 family ), Uma2 (pfam05685)
RVT_N (pfam13655), carb_red_sniffer_like_SDR_c (cd05325), VirB8 (pfam04335), sigma70-ECF (TIGR02937), mraY (TIGR00445), LSm16_N (cd01737), H_lectin (pfam09458), McrA (COG4058), CAAD (pfam14159), QueD (COG0720)
YkfC (COG3344), NrdF (COG0208), cyano_PEP (TIGR04155), M3A_DCP (cd06456), DDE_Tnp_ISAZ013 (pfam07592)

Seq: AADV02000006.1 Crocosphaera watsonii WH 8501 ctg357, whole genome shotgun sequence (136356 bp)
Overview 1 RT 1: 21446-26119 bp 2 RT 2: 86686-91391 bp 3 RT 3: 125820-133924 bp Neighborhood of RT #1 [21446, 26124] DDE_Tnp_1_4 DDE_Tnp_1_4 RVT-GII DDE_Tnp_ISAZ013 DDE_Tnp_ISAZ013 Neighborhood of RT #2 [86686, 91483] PRK01117 PRK05943 RVT_N RVT-GII HTH_23 HTH_32 DDE_3 Neighborhood of RT #3 [125820, 133929] Cys_rich_CPXG tol_pal_ybgF tol_pal_ybgF MltE RVT-UG17 PLN03069 Feature: gene Location: 21446-22363 bp Ori: EAM51225.1 Feature: domain Description: DDE_Tnp_1_4 Location: 21491-22349 bp Feature: domain Description: DDE_Tnp_1_4 Location: 21491-22 349 bp Feature: gene Location: 22329-22931 bp Ori: EAM51226.1 Feature: domain Description: DDE_Tnp_1_4 Location: 22383-22920 bp Feature: domain Description: DDE_Tnp_1_4 Location: 22 383-22 920 bp Feature: gene Location: 23418-24413 bp Ori: EAM51227.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 23532-24219 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 23532-24219 bp Feature: gene Location: 24953-25447 bp Ori: EAM51228.1 Feature: domain Description: DDE_Tnp_ISAZ013 Location: 25205-25427 bp Feature: domain Description: DDE_Tnp_ISAZ013 Location: 25205-25427 bp Feature: gene Location: 25492-26124 bp Ori: EAM51229.1 Feature: domain Description: DDE_Tnp_ISAZ013 Location: 25495-26119 bp Feature: domain Description: DDE_Tnp_ISAZ013 Location: 25495-26119 bp Feature: gene Location: 86686-88026 bp Ori: EAM51290.1 Feature: domain Description: PRK01117 Location: 86692-87967 bp Feature: domain Description: PRK01117 Location: 86692-87967 bp Feature: gene Location: 88060-88371 bp Ori: EAM51291.1 Feature: domain Description: PRK05943 Location: 88069-88348 bp Feature: domain Description: PRK05943 Location: 88069-88348 bp Feature: gene Location: 88988-90187 bp Ori: EAM51292.1 Feature: domain Description: RVT_N Location: 89027-89273 bp Feature: domain Description: RVT_N Location: 89027-89273 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 89318-90011 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 89318-90011 bp Feature: gene Location: 90196-90777 bp Ori: EAM51293.1 Feature: domain Description: HTH_23 Location: 90328-90448 bp Feature: domain Description: HTH_23 Location: 90328-90448 bp Feature: domain Description: HTH_32 Location: 90526-90721 bp Feature: domain Description: HTH_32 Location: 90526-90721 bp Feature: gene Location: 90842-91483 bp Ori: EAM51294.1 Feature: domain Description: DDE_3 Location: 90866-91391 bp Feature: domain Description: DDE_3 Location: 90866-91391 bp Feature: gene Location: 125820-126008 bp Ori: EAM51329.1 Feature: domain Description: Cys_rich_CPXG Location: 125841-125994 bp Feature: domain Description: Cys_rich_CPXG Location: 125841-125994 bp Feature: gene Location: 126136-128316 bp Ori: EAM51330.1 Feature: domain Description: tol_pal_ybgF Location: 126400-126619 bp Feature: domain Description: tol_pal_ybgF Location: 126400-126619 bp Feature: domain Description: tol_pal_ybgF Location: 127087-127258 bp Feature: domain Description: tol_pal_ybgF Location: 127087-127258 bp Feature: domain Description: MltE Location: 127366-128296 bp Feature: domain Description: MltE Location: 127366-128296 bp Feature: gene Location: 128574-129062 bp Ori: EAM51331.1 Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 128817-129015 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 128817-129015 bp Feature: gene Location: 129320-129583 bp Feature: gene Location: 129937-133929 bp Ori: EAM51333.1 Feature: domain Description: PLN03069 Location: 129940-133924 bp Feature: domain Description: PLN03069 Location: 129940-133924 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_1_4 (pfam13701), RVT-GII, DDE_Tnp_ISAZ013 (pfam07592), PRK01117 (adenylosuccinate synthetase; Provisional), PRK05943 (50S ribosomal protein L25; Reviewed), RVT_N (pfam13655), HTH_23 (pfam13384), HTH_32 (pfam13565), DDE_3 (pfam13358), Cys_rich_CPXG (pfam14255)
tol_pal_ybgF (TIGR02795), MltE (COG0741), RVT-UG17, PLN03069 (magnesiumprotoporphyrin-IX chelatase subunit H; Provisional)

Seq: AADV02000040.1 Crocosphaera watsonii WH 8501 ctg329, whole genome shotgun sequence (25559 bp)
Overview 1 RT 1: 5087-11883 bp Neighborhood of RT #1 [5087, 12734] PleD RVT_N RVT-GII GIIM HNHc PTPS_related Feature: gene Location: 5087-5617 bp Ori: EAM50075.1 Feature: domain Description: PleD Location: 5114-5606 bp Feature: domain Description: PleD Location: 5114-5606 bp Feature: gene Location: 5633-6070 bp Feature: gene Location: 6208-7998 bp Ori: EAM50073.1 Feature: domain Description: RVT_N Location: 6247-6493 bp Feature: domain Description: RVT_N Location: 6247-6493 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6538-7231 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6538-723 1 bp Feature: domain Description: GIIM Note: maturase Location: 7345-7573 bp Feature: domain Description: GIIM Note: maturase Location: 7345-7573 bp Feature: domain Description: HNHc Note: nucleases Location: 7756-7909 bp Feature: domain Description: HNHc Note: nucleases Location: 7756-7909 bp Feature: gene Location: 8917-10596 bp Feature: gene Location: 10611-12734 bp Ori: EAM50061.1 Feature: domain Description: PTPS_related Location: 10872-11883 bp Feature: domain Description: PTPS_related Location: 10872-11883 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PleD (COG3706), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507), PTPS_related (pfam10131)

Seq: AADV02000287.1 Crocosphaera watsonii WH 8501 ctg112, whole genome shotgun sequence (3084 bp)
Overview 1 RT 1: 268-2850 bp Neighborhood of RT #1 [268, 2936] RVT_N RVT-GII RVT-GII GIIM McrA COG5421 Feature: gene Location: 268-678 bp Feature: gene Location: 817-2331 bp Ori: EAM47526.1 Feature: domain Description: RVT_N Location: 856-1102 bp Feature: domain Description: RVT_N Location: 856-1102 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1150-1576 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1150-1576 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1576-1744 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1576-1744 bp Feature: domain Description: GIIM Note: maturase Location: 1801-1924 bp Feature: domain Description: GIIM Note: maturase Location: 1801-1924 bp Feature: domain Description: McrA Location: 2017-2299 bp Feature: domain Description: McrA Location: 2017-2299 bp Feature: gene Location: 2610-2936 bp Ori: EAM47525.1 Feature: domain Description: COG5421 Location: 2613-2850 bp Feature: domain Description: COG5421 Location: 2613-2850 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), McrA (COG4058), COG5421 (Transposase )

Seq: AADV02000012.1 Crocosphaera watsonii WH 8501 ctg345, whole genome shotgun sequence (42698 bp)
Overview 1 RT 1: 32464-37486 bp Neighborhood of RT #1 [32464, 37488] RelE RVT_N RVT-GII RVT-GII GIIM HNH PRK12864 Feature: gene Location: 32464-33471 bp Feature: gene Location: 34095-34430 bp Ori: EAM50908.1 Feature: domain Description: RelE Location: 34098-34383 bp Feature: domain Description: RelE Location: 34098-34383 bp Feature: gene Location: 35514-35747 bp Ori: EAM50909.1 Feature: domain Description: RVT_N Location: 35517-35607 bp Feature: domain Description: RVT_N Location: 35517-35607 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 35652-35745 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 35652-35745 bp Feature: gene Location: 35973-36794 bp Ori: EAM50910.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 35976-36345 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 35976-36345 bp Feature: domain Description: GIIM Note: maturase Location: 36459-36687 bp Feature: domain Description: GIIM Note: maturase Location: 36459-36687 bp Feature: gene Location: 36799-37113 bp Ori: EAM50911.1 Feature: domain Description: HNH Note: nucleases Location: 36898-37030 bp Feature: domain Description: HNH Note: nucleases Location: 36898-37030 bp Feature: gene Location: 37219-37488 bp Ori: EAM50912.1 Feature: domain Description: PRK12864 Location: 37222-37486 bp Feature: domain Description: PRK12864 Location: 37222-37486 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RelE (pfam06296), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNH (pfam01844), PRK12864 (YciI-like protein; Reviewed)

Seq: AADV02000029.1 Crocosphaera watsonii WH 8501 ctg333, whole genome shotgun sequence (31207 bp)
Overview 1 RT 1: 25951-30583 bp Neighborhood of RT #1 [25951, 30583] DDE_5 RVT_N RVT-GII Feature: gene Location: 25951-27390 bp Ori: EAM50345.1 Feature: domain Description: DDE_5 Location: 26011-26839 bp Feature: domain Description: DDE_5 Location: 26 011-26 839 bp Feature: gene Location: 27470-27865 bp Feature: gene Location: 27985-29214 bp Ori: EAM50344.1 Feature: domain Description: RVT_N Location: 28024-28270 bp Feature: domain Description: RVT_N Location: 28024-28270 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 28315-29008 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 28315-29008 bp Feature: gene Location: 30323-30583 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_5 (pfam13546), RVT_N (pfam13655), RVT-GII

Seq: AADV02000131.1 Crocosphaera watsonii WH 8501 ctg206, whole genome shotgun sequence (12046 bp)
Overview 1 RT 1: 990-3540 bp Neighborhood of RT #1 [990, 3875] RVT_N RVT-GII GIIM COG5421 Feature: gene Location: 990-1928 bp Ori: EAM48583.1 Feature: domain Description: RVT_N Location: 1107-1353 bp Feature: domain Description: RVT_N Location: 1107-1353 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1395-1881 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1395-1881 bp Feature: gene Location: 1935-2546 bp Ori: EAM48584.1 Feature: domain Description: GIIM Note: maturase Location: 2211-2442 bp Feature: domain Description: GIIM Note: maturase Location: 2211-2442 bp Feature: gene Location: 2664-3875 bp Ori: EAM48585.1 Feature: domain Description: COG5421 Location: 3159-3540 bp Feature: domain Description: COG5421 Location: 3159-3540 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), COG5421 (Transposase )