myRT

myRT report for GCA_000167895.3_ASM16789v3

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Seq: AB024946.1 Escherichia coli B171 plasmid pB171 DNA, complete sequence (68817 bp)
Overview 1 RT 1: 48486-52176 bp Neighborhood of RT #1 [48486, 52211] RVT-GII GIIM PHA02517 Glu-decarb-GAD Feature: gene Location: 48486-48917 bp Feature: gene Location: 48832-49140 bp Feature: gene Location: 49226-50734 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 49484-50216 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 49484-5021 6 bp Feature: domain Description: GIIM Note: maturase Location: 50291-50489 bp Feature: domain Description: GIIM Note: maturase Location: 50291 -50489 bp Feature: gene Location: 50887-51303 bp Feature: domain Description: PHA02517 Location: 50890-51292 bp Feature: domain Description: PHA0251 7 Location: 50890-51 292 bp Feature: gene Location: 51726-52211 bp Feature: domain Description: Glu-decarb-GAD Location: 51795-52176 bp Feature: domain Description: Glu-decarb-GAD Location: 51 795-521 76 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), PHA02517 (putative transposase OrfB; Reviewed), Glu-decarb-GAD (TIGR01788)

Seq: AAJX02000003.1 Escherichia coli B171 gcontig_1112554187854, whole genome shotgun sequence (221761 bp)
Overview 1 RT 1: 94069-101305 bp Neighborhood of RT #1 [94069, 101319] fecE RVT-GII GIIM CE4_Ecf1_like_5s CE4_Ecf1_like_5s GT4_PimA-like Feature: gene Location: 94069-94836 bp Feature: domain Description: fecE Location: 94072-94834 bp Feature: domain Description: fecE Location: 94072 -94834 bp Feature: gene Location: 95394-95537 bp Feature: gene Location: 96302-97825 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 96575-97307 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 96575-97307 bp Feature: domain Description: GIIM Note: maturase Location: 97382-97580 bp Feature: domain Description: GIIM Note: maturase Location: 97382 -97580 bp Feature: gene Location: 99407-100228 bp Feature: domain Description: CE4_Ecf1_like_5s Location: 99485-99881 bp Feature: domain Description: CE4_Ecf1_like_5s Location: 99485-99881 bp Feature: domain Description: CE4_Ecf1_like_5s Location: 99887-100166 bp Feature: domain Description: CE4_Ecf1_like_5s Location: 99887-100166 bp Feature: gene Location: 100231-101319 bp Feature: domain Description: GT4_PimA-like Location: 100240-101305 bp Feature: domain Description: GT4_PimA-like Location: 1002 40-101305 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT GT4_PimA-like (cd03801), fecE (PRK11231), RVT-GII, GIIM (pfam08388), CE4_Ecf1_like_5s (cd10969)