myRT

myRT report for GCA_000167975.1_ASM16797v1

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Seq: AALC02000035.1 Yersinia bercovieri ATCC 43970 contig01135, whole genome shotgun sequence (44456 bp)
Overview 1 RT 1: 660-6387 bp Neighborhood of RT #1 [660, 6395] GerD RVT-UG1 DUF4942 CbeA_antitoxin Feature: gene Location: 660-1094 bp Ori: EEQ06067.1 Feature: domain Description: GerD Location: 738-852 bp Feature: domain Description: GerD Location: 738-852 bp Feature: gene Location: 1103-4801 bp Ori: EEQ06068.1 Feature: RT Description: RVT-UG1 Note: UG1 RT Location: 1715-2231 bp Feature: RT Description: RVT-UG1 Note: UG1 RT Location: 1 71 5-2231 bp Feature: gene Location: 5331-6191 bp Ori: EEQ06069.1 Feature: domain Description: DUF4942 Location: 5604-6168 bp Feature: domain Description: DUF4942 Location: 5604-61 68 bp Feature: gene Location: 6276-6395 bp Ori: EEQ06070.1 Feature: domain Description: CbeA_antitoxin Location: 6282-6387 bp Feature: domain Description: CbeA_antitoxin Location: 6282-6387 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT GerD (pfam17898), RVT-UG1, DUF4942 (pfam13708), CbeA_antitoxin (pfam06154)

Seq: AALC02000145.1 Yersinia bercovieri ATCC 43970 contig01142.2, whole genome shotgun sequence (750 bp)
Overview 1 RT 1: 11-503 bp Neighborhood of RT #1 [11, 652] RVT-GII GIIM Feature: gene Location: 11-652 bp Ori: EEQ04711.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14-239 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14-2 39 bp Feature: domain Description: GIIM Note: maturase Location: 287-503 bp Feature: domain Description: GIIM Note: maturase Location: 2 87-503 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: AALC02000130.1 Yersinia bercovieri ATCC 43970 contig01114.2, whole genome shotgun sequence (1114 bp)
Overview 1 RT 1: 417-1113 bp Neighborhood of RT #1 [417, 1114] RVT-GII Feature: gene Location: 417-1114 bp Ori: EEQ04717.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 738-1113 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 73 8-1113 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: AALC02000144.1 Yersinia bercovieri ATCC 43970 contig01142.3, whole genome shotgun sequence (750 bp)
Overview 1 RT 1: 11-503 bp Neighborhood of RT #1 [11, 652] RVT-GII GIIM Feature: gene Location: 11-652 bp Ori: EEQ04712.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14-239 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14 -239 bp Feature: domain Description: GIIM Note: maturase Location: 287-503 bp Feature: domain Description: GIIM Note: maturase Location: 287-503 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: AALC02000131.1 Yersinia bercovieri ATCC 43970 contig01114.1, whole genome shotgun sequence (1114 bp)
Overview 1 RT 1: 417-1113 bp Neighborhood of RT #1 [417, 1114] RVT-GII Feature: gene Location: 417-1114 bp Ori: EEQ04716.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 738-1113 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 738-1113 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: AALC02000146.1 Yersinia bercovieri ATCC 43970 contig01142.1, whole genome shotgun sequence (750 bp)
Overview 1 RT 1: 11-503 bp Neighborhood of RT #1 [11, 652] RVT-GII GIIM Feature: gene Location: 11-652 bp Ori: EEQ04710.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14-239 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14-239 bp Feature: domain Description: GIIM Note: maturase Location: 287-503 bp Feature: domain Description: GIIM Note: maturase Location: 287-503 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: AALC02000129.1 Yersinia bercovieri ATCC 43970 contig01114.3, whole genome shotgun sequence (1114 bp)
Overview 1 RT 1: 417-1113 bp Neighborhood of RT #1 [417, 1114] RVT-GII Feature: gene Location: 417-1114 bp Ori: EEQ04718.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 738-1113 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7 38-1113 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII