myRT

myRT report for GCA_000168935.3_ASM16893v3

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Seq: KQ257285.1 Vibrio cholerae MZO-3 genomic scaffold supercont1.2, whole genome shotgun sequence (1096293 bp)
Overview 1 RT 1: 149700-156515 bp Neighborhood of RT #1 [149700, 156517] PRK10590 SLATT_5 RVT-UG17 PRK05096 OMP_b-brl Feature: gene Location: 149700-151094 bp Ori: KNA50000.1 Feature: domain Description: PRK10590 Location: 149703-151047 bp Feature: domain Description: PRK1 0590 Location: 1 49703-1 51 047 bp Feature: gene Location: 151975-152628 bp Ori: KNA50001.1 Feature: domain Description: SLATT_5 Location: 151984-152572 bp Feature: domain Description: SLATT_5 Location: 1 51 984-1 52572 bp Feature: gene Location: 152630-153961 bp Ori: KNA50002.1 Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 152858-153461 bp Feature: RT Description: RVT-UG1 7 Note: UG1 7 RT Location: 1 52858-1 53461 bp Feature: gene Location: 154268-155311 bp Ori: KNA50003.1 Feature: domain Description: PRK05096 Location: 154271-155303 bp Feature: domain Description: PRK05096 Location: 1 54271 -1 55303 bp Feature: gene Location: 155969-156517 bp Ori: KNA50004.1 Feature: domain Description: OMP_b-brl Location: 156002-156515 bp Feature: domain Description: OMP_b-brl Location: 1 56002-1 5651 5 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10590 (ATP-dependent RNA helicase RhlE; Provisional), SLATT_5 (pfam18160), RVT-UG17, PRK05096 (guanosine 5'-monophosphate oxidoreductase; Provisional), OMP_b-brl (pfam13505)

Seq: KQ257297.1 Vibrio cholerae MZO-3 genomic scaffold supercont1.14, whole genome shotgun sequence (22937 bp)
Overview 1 RT 1: 5559-9326 bp Neighborhood of RT #1 [5559, 9415] StbD RVT-Retrons HTH_XRE SnoaL_2 Feature: gene Location: 5559-5852 bp Ori: KNA44579.1 Feature: domain Description: StbD Location: 5589-5832 bp Feature: domain Description: StbD Location: 5589-5832 bp Feature: gene Location: 6307-6516 bp Feature: gene Location: 7121-8080 bp Ori: KNA44581.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 7283-7778 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 72 83-7778 bp Feature: gene Location: 8067-8363 bp Ori: KNA44582.1 Feature: domain Description: HTH_XRE Location: 8091-8253 bp Feature: domain Description: HTH_XRE Location: 8091-82 53 bp Feature: gene Location: 9023-9415 bp Ori: KNA44583.1 Feature: domain Description: SnoaL_2 Location: 9050-9326 bp Feature: domain Description: SnoaL_2 Location: 9050-932 6 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT StbD (COG2161), RVT-Retrons, HTH_XRE (smart00530), SnoaL_2 (pfam12680)