myRT

myRT report for GCA_000169015.1_ASM16901v1

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Seq: AAVM02000003.1 Bacteroides caccae ATCC 43185 B_caccae-MSIQ_Cont1328, whole genome shotgun sequence (500031 bp)
Overview 1 RT 1: 458617-470226 bp Neighborhood of RT #1 [458617, 470342] RVT-Retrons DUF4011 DEXXQc_SF1 DEXXQc_SF1 TIGR00376 MTES_1575 DUF3320 rpsA Feature: gene Location: 458617-458760 bp Feature: gene Location: 458946-461153 bp Feature: gene Location: 461356-462486 bp Ori: EDM21243.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 461677-462229 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 461 677-462229 bp Feature: gene Location: 462483-468449 bp Ori: EDM21244.1 Feature: domain Description: DUF4011 Location: 463713-464226 bp Feature: domain Description: DUF401 1 Location: 46371 3-464226 bp Feature: domain Description: DEXXQc_SF1 Location: 464565-465180 bp Feature: domain Description: DEXXQc_SF1 Location: 464565-4651 80 bp Feature: domain Description: DEXXQc_SF1 Location: 465810-466752 bp Feature: domain Description: DEXXQc_SF1 Location: 46581 0-466752 bp Feature: domain Description: TIGR00376 Location: 466881-467274 bp Feature: domain Description: TIGR00376 Location: 466881 -467274 bp Feature: domain Description: MTES_1575 Location: 467424-467709 bp Feature: domain Description: MTES_1 575 Location: 467424-467709 bp Feature: domain Description: DUF3320 Location: 467958-468099 bp Feature: domain Description: DUF3320 Location: 467958-468099 bp Feature: gene Location: 468546-470342 bp Ori: EDM21245.1 Gene: rpsA Feature: domain Description: rpsA Location: 468612-470226 bp Feature: domain Description: rpsA Location: 46861 2-470226 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, DUF4011 (pfam13195), DEXXQc_SF1 (cd18043), TIGR00376 (DNA helicase, putative), MTES_1575 (pfam18741), DUF3320 (pfam11784), rpsA (TIGR00717)