myRT

myRT report for GCA_000169715.1_ASM16971v1

Download annotations/find similar RTs

Seq: AAYX01000002.1 Burkholderia pseudomallei 305 g_contig_BUA.Contig1109, whole genome shotgun sequence (750025 bp)
Overview 1 RT 1: 224079-230816 bp 2 RT 2: 662393-666160 bp Neighborhood of RT #1 [224079, 230848] Tra5 DDE_Tnp_IS66 DDE_Tnp_IS66_C RVT-GII GIIM COG3436 rve TnpB_IS66 Neighborhood of RT #2 [662393, 666192] DDE_Tnp_IS66 DDE_Tnp_IS66_C DDE_Tnp_IS66 RVT-GII GIIM COG3436 TnpB_IS66 Feature: gene Location: 224079-224906 bp Feature: domain Description: Tra5 Location: 224091-224859 bp Feature: domain Description: Tra5 Location: 224091 -224859 bp Feature: gene Location: 225898-226863 bp Feature: domain Description: DDE_Tnp_IS66 Location: 225919-226708 bp Feature: domain Description: DDE_Tnp_IS66 Location: 22591 9-226708 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 226729-226840 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 226729-226840 bp Feature: gene Location: 226897-228159 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 227101-227758 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2271 01 -227758 bp Feature: domain Description: GIIM Note: maturase Location: 227836-228052 bp Feature: domain Description: GIIM Note: maturase Location: 227836-228052 bp Feature: gene Location: 228677-229312 bp Feature: domain Description: COG3436 Location: 228986-229289 bp Feature: domain Description: COG3436 Location: 228986-229289 bp Feature: gene Location: 229376-230848 bp Feature: domain Description: rve Location: 229766-230144 bp Feature: domain Description: rve Location: 229766-2301 44 bp Feature: domain Description: TnpB_IS66 Location: 230624-230816 bp Feature: domain Description: TnpB_IS66 Location: 230624-23081 6 bp Feature: gene Location: 662393-662887 bp Feature: domain Description: DDE_Tnp_IS66 Location: 662402-662732 bp Feature: domain Description: DDE_Tnp_IS66 Location: 662402-662732 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 662753-662864 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 662753-662864 bp Feature: gene Location: 662956-663372 bp Feature: domain Description: DDE_Tnp_IS66 Location: 662977-663328 bp Feature: domain Description: DDE_Tnp_IS66 Location: 662977-663328 bp Feature: gene Location: 663406-664668 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 663610-664267 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 66361 0-664267 bp Feature: domain Description: GIIM Note: maturase Location: 664345-664561 bp Feature: domain Description: GIIM Note: maturase Location: 664345-664561 bp Feature: gene Location: 665186-665815 bp Feature: domain Description: COG3436 Location: 665483-665792 bp Feature: domain Description: COG3436 Location: 665483-665792 bp Feature: gene Location: 665845-666192 bp Feature: domain Description: TnpB_IS66 Location: 665872-666160 bp Feature: domain Description: TnpB_IS66 Location: 665872-6661 60 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Tra5 (COG2801), DDE_Tnp_IS66 (pfam03050), DDE_Tnp_IS66_C (pfam13817), RVT-GII, GIIM (pfam08388), COG3436 (Transposase ), rve (pfam00665), TnpB_IS66 (pfam05717)