myRT

myRT report for GCA_000170495.1_ASM17049v1

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Seq: ABBM01001158.1 Burkholderia thailandensis MSMB43 PMP6xxBPSxx381-1158, whole genome shotgun sequence (8515 bp)
Overview 1 RT 1: 3346-7763 bp Neighborhood of RT #1 [3346, 8512] RVT-UG7 Feature: gene Location: 3346-3954 bp Feature: gene Location: 4095-6674 bp Feature: gene Location: 6953-8512 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 7367-7763 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 7367-7763 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG7

Seq: ABBM01001082.1 Burkholderia thailandensis MSMB43 PMP6xxBPSxx381-1082, whole genome shotgun sequence (30863 bp)
Overview 1 RT 1: 11342-16783 bp Neighborhood of RT #1 [11342, 16806] Dcm Dcm RVT-DGRs Avd_like DUF1566 Feature: gene Location: 11342-12841 bp Feature: gene Location: 12860-14623 bp Feature: domain Description: Dcm Location: 12911-13358 bp Feature: domain Description: Dcm Location: 12 911-13358 bp Feature: domain Description: Dcm Location: 13454-14579 bp Feature: domain Description: Dcm Location: 13454-14579 bp Feature: gene Location: 14620-15960 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 15043-15730 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 15043-15730 bp Feature: gene Location: 15953-16327 bp Feature: domain Description: Avd_like Location: 15980-16286 bp Feature: domain Description: Avd_like Location: 15980-162 86 bp Feature: gene Location: 16342-16806 bp Feature: domain Description: DUF1566 Location: 16603-16783 bp Feature: domain Description: DUF1566 Location: 16603-16783 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Dcm (COG0270), RVT-DGRs, Avd_like (cd16376), DUF1566 (pfam07603)

Seq: ABBM01001064.1 Burkholderia thailandensis MSMB43 PMP6xxBPSxx381-1064, whole genome shotgun sequence (2079 bp)
Overview 1 RT 1: 114-2060 bp Neighborhood of RT #1 [114, 2077] RVT-GII TnpB_IS66 Feature: gene Location: 114-1595 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 525-1215 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 525-1215 bp Feature: gene Location: 1925-2077 bp Feature: domain Description: TnpB_IS66 Location: 1931-2060 bp Feature: domain Description: TnpB_IS66 Location: 193 1-2060 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, TnpB_IS66 (pfam05717)

Seq: ABBM01000958.1 Burkholderia thailandensis MSMB43 PMP6xxBPSxx381-958, whole genome shotgun sequence (1543 bp)
Overview 1 RT 1: 3-1110 bp Neighborhood of RT #1 [3, 1109] RVT-GII GIIM Feature: gene Location: 3-1109 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 342-957 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 34 2-957 bp Feature: domain Description: GIIM Note: maturase Location: 1011-1110 bp Feature: domain Description: GIIM Note: maturase Location: 1011-1110 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)