myRT

myRT report for GCA_000171035.2_ASM17103v2

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Seq: ABDL02000010.1 Bacillus cereus H3081.97 gcontig2_1113133506196, whole genome shotgun sequence (128200 bp)
Overview 1 RT 1: 91528-94774 bp Neighborhood of RT #1 [91528, 94774] RVT-GII HNHc Feature: gene Location: 91528-93456 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 91849-92584 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 91 849-92584 bp Feature: domain Description: HNHc Note: nucleases Location: 93175-93340 bp Feature: domain Description: HNHc Note: nucleases Location: 931 75-93340 bp Feature: gene Location: 94274-94411 bp Feature: gene Location: 94463-94774 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507)

Seq: CP001170.1 Bacillus cereus H3081.97 plasmid pH308197_73, complete sequence (72792 bp)
Overview 1 RT 1: 6970-14228 bp Neighborhood of RT #1 [6970, 14228] MobA_MobL VirD4 RVT-GII HNHc T4SS-DNA_transf Feature: gene Location: 6970-8976 bp Feature: domain Description: MobA_MobL Location: 7018-7639 bp Feature: domain Description: MobA_MobL Location: 7018-7639 bp Feature: gene Location: 8987-9580 bp Feature: domain Description: VirD4 Location: 9152-9569 bp Feature: domain Description: VirD4 Location: 9152 -9569 bp Feature: gene Location: 10296-12128 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10596-11301 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10596-11301 bp Feature: domain Description: HNHc Note: nucleases Location: 11880-12012 bp Feature: domain Description: HNHc Note: nucleases Location: 11880-12 012 bp Feature: gene Location: 12245-13927 bp Feature: domain Description: T4SS-DNA_transf Location: 12248-13334 bp Feature: domain Description: T4SS-DNA_transf Location: 12 2 48-13334 bp Feature: gene Location: 14010-14228 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507), T4SS-DNA_transf (pfam02534), MobA_MobL (pfam03389), VirD4 (COG3505)

Seq: ABDL02000015.1 Bacillus cereus H3081.97 gcontig2_1113133506128, whole genome shotgun sequence (92001 bp)
Overview 1 RT 1: 88304-91172 bp Neighborhood of RT #1 [88304, 91288] YugN amiF RVT-GII HNHc Feature: gene Location: 88304-88669 bp Feature: domain Description: YugN Location: 88322-88571 bp Feature: domain Description: YugN Location: 883 22-88571 bp Feature: gene Location: 88716-89339 bp Feature: domain Description: amiF Location: 88719-89334 bp Feature: domain Description: amiF Location: 88719-893 3 4 bp Feature: gene Location: 89456-91288 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 89756-90461 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 89756-90461 bp Feature: domain Description: HNHc Note: nucleases Location: 91040-91172 bp Feature: domain Description: HNHc Note: nucleases Location: 91040-91172 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YugN (pfam08868), amiF (PRK13287), RVT-GII, HNHc (smart00507)

Seq: CP001166.1 Bacillus cereus H3081.97 plasmid pH308197_258, complete sequence (258484 bp)
Overview 1 RT 1: 95724-104436 bp 2 RT 2: 160770-168408 bp 3 RT 3: 173398-178625 bp 4 RT 4: 241436-251970 bp Neighborhood of RT #1 [95724, 104513] TraC-F-type RVT-GII HNHc TraC-F-type Neighborhood of RT #2 [160770, 168408] TraG-D_C Ftsk_gamma Ftsk_gamma RVT_N RVT-GII GIIM nuc_hydro Neighborhood of RT #3 [173398, 178630] COG4712 RVT-GII beta_clamp Neighborhood of RT #4 [241436, 251970] RVT-GII HNHc MTS DEXDc RVT-GII HNHc HepA Feature: gene Location: 95724-99704 bp Feature: gene Location: 99735-100703 bp Feature: domain Description: TraC-F-type Location: 99762-100542 bp Feature: domain Description: TraC-F-type Location: 99762-10054 2 bp Feature: gene Location: 100994-102826 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 101294-101999 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 101294 -101999 bp Feature: domain Description: HNHc Note: nucleases Location: 102578-102710 bp Feature: domain Description: HNHc Note: nucleases Location: 102578-102710 bp Feature: gene Location: 103219-103341 bp Feature: gene Location: 103542-104513 bp Feature: domain Description: TraC-F-type Location: 103962-104436 bp Feature: domain Description: TraC-F-type Location: 103962-104 4 36 bp Feature: gene Location: 160770-161156 bp Feature: gene Location: 161174-164674 bp Feature: domain Description: TraG-D_C Location: 162791-163151 bp Feature: domain Description: TraG-D_C Location: 162791-163151 bp Feature: domain Description: Ftsk_gamma Location: 163559-163736 bp Feature: domain Description: Ftsk_gamma Location: 163559-163736 bp Feature: domain Description: Ftsk_gamma Location: 163868-164003 bp Feature: domain Description: Ftsk_gamma Location: 163868-164 003 bp Feature: gene Location: 164887-166533 bp Feature: RT Description: RVT_N Location: 164929-165166 bp Feature: RT Description: RVT_N Location: 164 929-165166 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 165220-165880 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 165220-165880 bp Feature: domain Description: GIIM Note: maturase Location: 165949-166180 bp Feature: domain Description: GIIM Note: maturase Location: 16594 9-166180 bp Feature: gene Location: 167253-168203 bp Feature: domain Description: nuc_hydro Location: 167268-168174 bp Feature: domain Description: nuc_hydro Location: 167268-168174 bp Feature: gene Location: 168295-168408 bp Feature: gene Location: 173398-173793 bp Feature: gene Location: 173816-174172 bp Feature: domain Description: COG4712 Location: 173825-174167 bp Feature: domain Description: COG4 712 Location: 173825-174 167 bp Feature: gene Location: 174934-176832 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 175249-175951 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 17524 9-175951 bp Feature: gene Location: 176910-177437 bp Feature: gene Location: 177518-178630 bp Feature: domain Description: beta_clamp Location: 177521-178625 bp Feature: domain Description: beta_clamp Location: 177521-178625 bp Feature: gene Location: 241436-241552 bp Feature: gene Location: 241612-241725 bp Feature: gene Location: 241809-243737 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 242130-242865 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 24 2130-24 2865 bp Feature: domain Description: HNHc Note: nucleases Location: 243456-243621 bp Feature: domain Description: HNHc Note: nucleases Location: 24 34 56-24 3621 bp Feature: gene Location: 243882-245003 bp Feature: domain Description: MTS Location: 243978-244341 bp Feature: domain Description: MTS Location: 24 3978-24 4 34 1 bp Feature: gene Location: 245019-245246 bp Feature: gene Location: 245318-246997 bp Feature: domain Description: DEXDc Location: 246098-246971 bp Feature: domain Description: DEXDc Location: 24 6098-24 6971 bp Feature: gene Location: 247562-247723 bp Feature: gene Location: 247698-249497 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 248001-248703 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 24 8001-24 8703 bp Feature: domain Description: HNHc Note: nucleases Location: 249228-249378 bp Feature: domain Description: HNHc Note: nucleases Location: 24 9228-24 9378 bp Feature: gene Location: 249558-251240 bp Feature: domain Description: HepA Location: 250452-250686 bp Feature: domain Description: HepA Location: 2504 52-250686 bp Feature: gene Location: 251257-251970 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507), TraC-F-type (TIGR02746), TraG-D_C (pfam12696), Ftsk_gamma (smart00843), RVT_N (pfam13655), GIIM (pfam08388), nuc_hydro (cl00226), COG4712 (Uncharacterized protein ), beta_clamp (cl29549)
MTS (pfam05175), DEXDc (smart00487), HepA (COG0553)

Seq: ABDL02000005.1 Bacillus cereus H3081.97 gcontig2_1113129654062, whole genome shotgun sequence (285049 bp)
Overview 1 RT 1: 17789-23584 bp Neighborhood of RT #1 [17789, 23586] PRK12451 RVT-GII Intron_maturas2 HNHc SAM_MT YphP_YqiW Feature: gene Location: 17789-19477 bp Feature: domain Description: PRK12451 Location: 17792-19475 bp Feature: domain Description: PRK1245 1 Location: 17792-19475 bp Feature: gene Location: 19778-19945 bp Feature: gene Location: 20103-21920 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 20367-21198 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 20367-21198 bp Feature: domain Description: Intron_maturas2 Location: 21279-21570 bp Feature: domain Description: Intron_maturas2 Location: 21279-215 70 bp Feature: domain Description: HNHc Note: nucleases Location: 21717-21894 bp Feature: domain Description: HNHc Note: nucleases Location: 21717-21894 bp Feature: gene Location: 22536-23102 bp Feature: domain Description: SAM_MT Location: 22659-23091 bp Feature: domain Description: SAM_MT Location: 2265 9-23091 bp Feature: gene Location: 23152-23586 bp Feature: domain Description: YphP_YqiW Location: 23176-23584 bp Feature: domain Description: YphP_YqiW Location: 23176-235 84 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK12451 (arginyl-tRNA synthetase; Reviewed), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), SAM_MT (pfam04445), YphP_YqiW (TIGR04191)

Seq: ABDL02000023.1 Bacillus cereus H3081.97 gcontig2_1113133506126, whole genome shotgun sequence (74045 bp)
Overview 1 RT 1: 32109-39375 bp Neighborhood of RT #1 [32109, 39383] mtnA mtnK RVT-GII HNHc nitrilase_5 PRK08068 Feature: gene Location: 32109-33164 bp Feature: domain Description: mtnA Location: 32133-33156 bp Feature: domain Description: mtnA Location: 32133-33156 bp Feature: gene Location: 33161-34342 bp Feature: domain Description: mtnK Location: 33164-34322 bp Feature: domain Description: mtnK Location: 3316 4-34322 bp Feature: gene Location: 34887-36719 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 35187-35892 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 35187-35892 bp Feature: domain Description: HNHc Note: nucleases Location: 36471-36603 bp Feature: domain Description: HNHc Note: nucleases Location: 36 471-36 6 03 bp Feature: gene Location: 37435-38214 bp Feature: domain Description: nitrilase_5 Location: 37549-38200 bp Feature: domain Description: nitrilase_5 Location: 37549-38200 bp Feature: gene Location: 38205-39383 bp Feature: domain Description: PRK08068 Location: 38214-39375 bp Feature: domain Description: PRK0806 8 Location: 38214-39375 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT mtnA (PRK05720), mtnK (PRK09550), RVT-GII, HNHc (smart00507), nitrilase_5 (cd07583), PRK08068 (transaminase; Reviewed)

Seq: ABDL02000006.1 Bacillus cereus H3081.97 gcontig2_1113133506634, whole genome shotgun sequence (242263 bp)
Overview 1 RT 1: 214784-220416 bp Neighborhood of RT #1 [214784, 220430] UbiE RVT-GII HNHc Methyltransf_23 PBP2_OppA Feature: gene Location: 214784-215173 bp Feature: gene Location: 215215-215757 bp Feature: domain Description: UbiE Location: 215296-215518 bp Feature: domain Description: UbiE Location: 215296-215518 bp Feature: gene Location: 215821-217653 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 216121-216826 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 216121-216826 bp Feature: domain Description: HNHc Note: nucleases Location: 217405-217537 bp Feature: domain Description: HNHc Note: nucleases Location: 217 405-217 537 bp Feature: gene Location: 218365-218613 bp Feature: domain Description: Methyltransf_23 Location: 218452-218593 bp Feature: domain Description: Methyltransf_23 Location: 218452-218593 bp Feature: gene Location: 218724-220430 bp Feature: domain Description: PBP2_OppA Location: 218892-220416 bp Feature: domain Description: PBP2_OppA Location: 218892-220416 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT UbiE (COG2226), RVT-GII, HNHc (smart00507), Methyltransf_23 (pfam13489), PBP2_OppA (cd08504)

Seq: ABDL02000001.1 Bacillus cereus H3081.97 gcontig2_1113133506624, whole genome shotgun sequence (619721 bp)
Overview 1 RT 1: 176270-181142 bp 2 RT 2: 551587-556749 bp Neighborhood of RT #1 [176270, 181207] DUF3006 ComEC RVT-GII HNHc SLH SLH SLH Acetyltransf_1 Neighborhood of RT #2 [551587, 556751] PRK09644 DUF3947 RVT-GII HNHc CHRD DUF3956 Feature: gene Location: 176270-176482 bp Feature: domain Description: DUF3006 Location: 176282-176477 bp Feature: domain Description: DUF3006 Location: 17628 2-176477 bp Feature: gene Location: 176485-177087 bp Feature: domain Description: ComEC Location: 176488-177085 bp Feature: domain Description: ComEC Location: 17648 8 -17708 5 bp Feature: gene Location: 177357-179189 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 177657-178362 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 177657-178 362 bp Feature: domain Description: HNHc Note: nucleases Location: 178941-179073 bp Feature: domain Description: HNHc Note: nucleases Location: 178 941-179073 bp Feature: gene Location: 179905-180549 bp Feature: domain Description: SLH Location: 179989-180115 bp Feature: domain Description: SLH Location: 17998 9-18 0115 bp Feature: domain Description: SLH Location: 180172-180292 bp Feature: domain Description: SLH Location: 18 0172-18 0292 bp Feature: domain Description: SLH Location: 180343-180472 bp Feature: domain Description: SLH Location: 18 0343-18 0472 bp Feature: gene Location: 180803-181207 bp Feature: domain Description: Acetyltransf_1 Location: 180884-181142 bp Feature: domain Description: Acetyltransf_1 Location: 18 08 8 4-18 1142 bp Feature: gene Location: 551587-552087 bp Feature: domain Description: PRK09644 Location: 551590-552085 bp Feature: domain Description: PRK09644 Location: 551590-55208 5 bp Feature: gene Location: 552704-552955 bp Feature: domain Description: DUF3947 Location: 552710-552953 bp Feature: domain Description: DUF3947 Location: 552710-552953 bp Feature: gene Location: 553475-555307 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 553775-554480 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 553775-55448 0 bp Feature: domain Description: HNHc Note: nucleases Location: 555059-555191 bp Feature: domain Description: HNHc Note: nucleases Location: 555059-555191 bp Feature: gene Location: 556023-556409 bp Feature: domain Description: CHRD Location: 556029-556395 bp Feature: domain Description: CHRD Location: 556029-556395 bp Feature: gene Location: 556614-556751 bp Feature: domain Description: DUF3956 Location: 556617-556749 bp Feature: domain Description: DUF3956 Location: 556617-556749 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF3006 (pfam11213), ComEC (COG2333), RVT-GII, HNHc (smart00507), SLH (pfam00395), Acetyltransf_1 (pfam00583), PRK09644 (RNA polymerase sigma factor SigM; Provisional), DUF3947 (pfam13135), CHRD (smart00754), DUF3956 (pfam13104)

Seq: ABDL02000007.1 Bacillus cereus H3081.97 gcontig2_1113133506146, whole genome shotgun sequence (233771 bp)
Overview 1 RT 1: 194334-199596 bp Neighborhood of RT #1 [194334, 199610] TTHA1623-like_MBL-fold RVT-GII HNHc PRK12856 YdiL Feature: gene Location: 194334-194468 bp Feature: gene Location: 194881-195294 bp Feature: domain Description: TTHA1623-like_MBL-fold Location: 194884-195280 bp Feature: domain Description: TTHA1623-like_MBL-fold Location: 19 4884-19 5280 bp Feature: gene Location: 195534-197366 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 195834-196539 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 19 5834-19 6539 bp Feature: domain Description: HNHc Note: nucleases Location: 197118-197250 bp Feature: domain Description: HNHc Note: nucleases Location: 19 7118-19 7250 bp Feature: gene Location: 198586-198897 bp Feature: domain Description: PRK12856 Location: 198589-198895 bp Feature: domain Description: PRK12856 Location: 19 8589 -19 889 5 bp Feature: gene Location: 198960-199610 bp Feature: domain Description: YdiL Location: 198993-199596 bp Feature: domain Description: YdiL Location: 19 89 9 3-19 9 59 6 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TTHA1623-like_MBL-fold (cd16322), RVT-GII, HNHc (smart00507), PRK12856 (hypothetical protein; Provisional), YdiL (COG1266)