myRT

myRT report for GCA_000171135.1_ASM17113v1

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Seq: ABDU01000049.2 Clostridium perfringens C str. JGS1495 gcontig_1106166512753, whole genome shotgun sequence (96799 bp)
Overview 1 RT 1: 4802-16845 bp Neighborhood of RT #1 [4802, 16856] Bacterial_PFK dnaE RVT-GII HNHc dnaE RVT-GII HNHc dnaE Sig70_famx3 Feature: gene Location: 4802-5761 bp Feature: domain Description: Bacterial_PFK Location: 4808-5750 bp Feature: domain Description: Bacterial_PFK Location: 4808-5750 bp Feature: gene Location: 6489-8321 bp Feature: domain Description: dnaE Location: 6492-8310 bp Feature: domain Description: dnaE Location: 6492-831 0 bp Feature: gene Location: 8491-10359 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8809-9514 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8809-951 4 bp Feature: domain Description: HNHc Note: nucleases Location: 10117-10282 bp Feature: domain Description: HNHc Note: nucleases Location: 1 01 1 7-1 0282 bp Feature: gene Location: 11084-11584 bp Feature: domain Description: dnaE Location: 11114-11567 bp Feature: domain Description: dnaE Location: 1 1 1 1 4-1 1 567 bp Feature: gene Location: 11671-13497 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11986-12682 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 986-1 2682 bp Feature: domain Description: HNHc Note: nucleases Location: 13252-13387 bp Feature: domain Description: HNHc Note: nucleases Location: 1 3252-1 3387 bp Feature: gene Location: 14603-15853 bp Feature: domain Description: dnaE Location: 14615-15839 bp Feature: domain Description: dnaE Location: 1 461 5-1 5839 bp Feature: gene Location: 16323-16856 bp Feature: domain Description: Sig70_famx3 Location: 16386-16845 bp Feature: domain Description: Sig70_famx3 Location: 1 6386-1 6845 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT dnaE (PRK07374), Bacterial_PFK (cd00763), RVT-GII, HNHc (smart00507), Sig70_famx3 (TIGR02954)

Seq: ABDU01000053.2 Clostridium perfringens C str. JGS1495 gcontig_1106166512755, whole genome shotgun sequence (22195 bp)
Overview 1 RT 1: 5354-10559 bp Neighborhood of RT #1 [5354, 10564] xerC RVT-GII HNHc xerC DUF3892 Feature: gene Location: 5354-5746 bp Feature: gene Location: 5837-6166 bp Feature: domain Description: xerC Location: 5858-6155 bp Feature: domain Description: xerC Location: 5858-6155 bp Feature: gene Location: 6319-8163 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6643-7357 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6643-7357 bp Feature: domain Description: HNHc Note: nucleases Location: 7918-8050 bp Feature: domain Description: HNHc Note: nucleases Location: 7918-8050 bp Feature: gene Location: 8870-9580 bp Feature: domain Description: xerC Location: 8978-9563 bp Feature: domain Description: xerC Location: 8978-9563 bp Feature: gene Location: 10346-10564 bp Feature: domain Description: DUF3892 Location: 10361-10559 bp Feature: domain Description: DUF3892 Location: 10361-10559 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF3892 (pfam13031), xerC (PRK01287), RVT-GII, HNHc (smart00507)