myRT

myRT report for GCA_000173575.1_ASM17357v1

Download annotations/find similar RTs

Seq: ABYL01000045.1 Burkholderia sp. H160 ctg00243, whole genome shotgun sequence (48250 bp)
Overview 1 RT 1: 28379-34088 bp Neighborhood of RT #1 [28379, 34147] PilA RVT-GII GIIM HNH PglL_A Wzy_C Wzy_C_2 NTP-PPase_RS21-C6_like Feature: gene Location: 28379-28951 bp Ori: EEA01278.1 Feature: domain Description: PilA Location: 28448-28694 bp Feature: domain Description: PilA Location: 28448-28694 bp Feature: gene Location: 30322-30426 bp Feature: gene Location: 30528-31832 bp Ori: EEA01280.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 30531-31119 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 30531 -31 1 1 9 bp Feature: domain Description: GIIM Note: maturase Location: 31170-31404 bp Feature: domain Description: GIIM Note: maturase Location: 31 1 70-31 404 bp Feature: domain Description: HNH Note: nucleases Location: 31656-31788 bp Feature: domain Description: HNH Note: nucleases Location: 31 656-31 788 bp Feature: gene Location: 31958-33742 bp Ori: EEA01281.1 Feature: domain Description: PglL_A Location: 32465-32537 bp Feature: domain Description: PglL_A Location: 32465-32537 bp Feature: domain Description: Wzy_C Location: 32585-33047 bp Feature: domain Description: Wzy_C Location: 32585-33047 bp Feature: domain Description: Wzy_C_2 Location: 33113-33617 bp Feature: domain Description: Wzy_C_2 Location: 331 1 3-3361 7 bp Feature: gene Location: 33797-34147 bp Ori: EEA01282.1 Feature: domain Description: NTP-PPase_RS21-C6_like Location: 33821-34088 bp Feature: domain Description: NTP-PPase_RS21 -C6_like Location: 33821 -34088 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PilA (COG4969), RVT-GII, GIIM (pfam08388), HNH (pfam01844), PglL_A (pfam15864), Wzy_C (pfam04932), Wzy_C_2 (pfam11846), NTP-PPase_RS21-C6_like (cd11537)

Seq: ABYL01000010.1 Burkholderia sp. H160 ctg00235, whole genome shotgun sequence (104581 bp)
Overview 1 RT 1: 42526-49444 bp Neighborhood of RT #1 [42526, 50268] RVT-UG15 COG4249 Feature: gene Location: 42526-43680 bp Feature: gene Location: 43643-44566 bp Feature: gene Location: 44715-46370 bp Ori: EEA03503.1 Feature: RT Description: RVT-UG15 Note: UG15 RT Location: 45126-45540 bp Feature: RT Description: RVT-UG15 Note: UG15 RT Location: 4512 6-45540 bp Feature: gene Location: 47036-48436 bp Feature: gene Location: 48643-50268 bp Ori: EEA03505.1 Feature: domain Description: COG4249 Location: 48793-49444 bp Feature: domain Description: COG42 49 Location: 48793-49444 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG15, COG4249 (Uncharacterized protein, contains caspase domain )