myRT

myRT report for GCA_000173975.1_ASM17397v1

Download annotations/find similar RTs

Seq: ACEP01000029.1 Anaerobutyricum hallii DSM 3353 E_hallii-1.0_Cont31.1, whole genome shotgun sequence (117864 bp)
Overview 1 RT 1: 31976-45735 bp Neighborhood of RT #1 [31976, 46115] COG4646 RVT-GII Intron_maturas2 HNHc KOG1000 YodL LPD16 DUF4316 LPD25 Feature: gene Location: 31976-33049 bp Feature: gene Location: 33118-39813 bp Feature: domain Description: COG4646 Location: 36844-39409 bp Feature: domain Description: COG4646 Location: 36844-39409 bp Feature: gene Location: 40363-42177 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 40627-41449 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 40627-41 449 bp Feature: domain Description: Intron_maturas2 Location: 41521-41953 bp Feature: domain Description: Intron_maturas2 Location: 41 521 -41 953 bp Feature: domain Description: HNHc Note: nucleases Location: 42004-42148 bp Feature: domain Description: HNHc Note: nucleases Location: 42004-421 48 bp Feature: gene Location: 42258-43295 bp Feature: domain Description: KOG1000 Location: 42285-42465 bp Feature: domain Description: KOG1 000 Location: 42285-42465 bp Feature: gene Location: 43377-46115 bp Feature: domain Description: YodL Location: 44157-44451 bp Feature: domain Description: YodL Location: 441 57-44451 bp Feature: domain Description: LPD16 Location: 44481-44703 bp Feature: domain Description: LPD1 6 Location: 44481 -44703 bp Feature: domain Description: DUF4316 Location: 44751-44835 bp Feature: domain Description: DUF431 6 Location: 44751 -44835 bp Feature: domain Description: LPD25 Location: 45444-45735 bp Feature: domain Description: LPD25 Location: 45444-45735 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG4646 (Adenine-specific DNA methylase, N12 class ), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), KOG1000 (KOG1000, Chromatin remodeling protein HARP/SMARCAL1, DEAD-box superfamily ), YodL (pfam14191), LPD16 (pfam18830), DUF4316 (pfam14195), LPD25 (pfam18840)