myRT

myRT report for GCA_000175235.1_ASM17523v1

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Seq: ACQT01000092.1 Acidovorax delafieldii 2AN ctg00125, whole genome shotgun sequence (13919 bp)
Overview 1 RT 1: 5736-13832 bp Neighborhood of RT #1 [5736, 13919] DUF349 DUF349 DUF349 PRK03624 RVT_N RVT-GII GIIM HNHc RNase_R Feature: gene Location: 5736-8477 bp Ori: EER59840.1 Feature: domain Description: DUF349 Location: 6861-6978 bp Feature: domain Description: DUF349 Location: 6861 -6978 bp Feature: domain Description: DUF349 Location: 7005-7233 bp Feature: domain Description: DUF349 Location: 7005-7233 bp Feature: domain Description: DUF349 Location: 7266-7419 bp Feature: domain Description: DUF349 Location: 7266-741 9 bp Feature: gene Location: 8482-8928 bp Ori: EER59841.1 Feature: domain Description: PRK03624 Location: 8500-8920 bp Feature: domain Description: PRK03624 Location: 8500-8920 bp Feature: gene Location: 9488-11212 bp Ori: EER59842.1 Feature: domain Description: RVT_N Location: 9545-9779 bp Feature: domain Description: RVT_N Location: 9545-9779 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9836-10481 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9836-1 0481 bp Feature: domain Description: GIIM Note: maturase Location: 10535-10766 bp Feature: domain Description: GIIM Note: maturase Location: 1 0535-1 0766 bp Feature: domain Description: HNHc Note: nucleases Location: 11006-11144 bp Feature: domain Description: HNHc Note: nucleases Location: 1 1 006-1 1 1 44 bp Feature: gene Location: 12245-13919 bp Ori: EER59843.1 Feature: domain Description: RNase_R Location: 12290-13832 bp Feature: domain Description: RNase_R Location: 1 2290-1 3832 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF349 (pfam03993), PRK03624 (putative acetyltransferase; Provisional), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507), RNase_R (TIGR02063)

Seq: ACQT01000045.1 Acidovorax delafieldii 2AN ctg00186, whole genome shotgun sequence (21974 bp)
Overview 1 RT 1: 1-4246 bp Neighborhood of RT #1 [1, 4251] RVT-UG7 PRK09692 PRK13222 Feature: gene Location: 1-1296 bp Ori: EER60650.1 Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 157-580 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 157-580 bp Feature: gene Location: 1709-2968 bp Ori: EER60651.1 Feature: domain Description: PRK09692 Location: 1751-2924 bp Feature: domain Description: PRK09692 Location: 1751-2 92 4 bp Feature: gene Location: 3586-4251 bp Ori: EER60652.1 Feature: domain Description: PRK13222 Location: 3592-4246 bp Feature: domain Description: PRK132 2 2 Location: 3592 -42 46 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG7, PRK09692 (Integrase; provisional), PRK13222 (N-acetylmuramic acid 6-phosphate phosphatase MupP)