myRT

myRT report for GCA_000175275.1_ASM17527v1

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Seq: ACQV01000021.1 Neisseria flavescens SK114 ctg1118407793863, whole genome shotgun sequence (53693 bp)
Overview 1 RT 1: 50489-53336 bp Neighborhood of RT #1 [50489, 53482] HTH_XRE RVT-Retrons DEAH_box_HrpA DEAH_box_HrpA Feature: gene Location: 50489-50707 bp Feature: gene Location: 50762-51049 bp Ori: EER56410.1 Feature: domain Description: HTH_XRE Location: 50774-50936 bp Feature: domain Description: HTH_XRE Location: 50774-50936 bp Feature: gene Location: 51042-51998 bp Ori: EER56395.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 51192-51756 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 51 1 92-51 756 bp Feature: gene Location: 52115-53482 bp Ori: EER56396.1 Feature: domain Description: DEAH_box_HrpA Location: 52235-52637 bp Feature: domain Description: DEAH_box_HrpA Location: 52235-52637 bp Feature: domain Description: DEAH_box_HrpA Location: 52721-53336 bp Feature: domain Description: DEAH_box_HrpA Location: 52721 -53336 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_XRE (smart00530), RVT-Retrons, DEAH_box_HrpA (TIGR01967)

Seq: ACQV01000011.1 Neisseria flavescens SK114 ctg1118407793864, whole genome shotgun sequence (44115 bp)
Overview 1 RT 1: 5-6204 bp Neighborhood of RT #1 [5, 6204] DUF3418 DUF3418 RVT-UG17 Feature: gene Location: 5-433 bp Ori: EER56954.1 Feature: domain Description: DUF3418 Location: 11-218 bp Feature: domain Description: DUF3418 Location: 11-2 18 bp Feature: gene Location: 460-2043 bp Ori: EER56911.1 Feature: domain Description: DUF3418 Location: 565-2026 bp Feature: domain Description: DUF3418 Location: 565-2 02 6 bp Feature: gene Location: 2085-3503 bp Ori: EER56936.1 Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 2313-2937 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 2 313-2 937 bp Feature: gene Location: 4675-4923 bp Feature: gene Location: 4924-6204 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF3418 (pfam11898), RVT-UG17