myRT

myRT report for GCA_000175835.1_ASM17583v1

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Seq: ACYA01000038.1 Cylindrospermopsis raciborskii CS-505 CS505_4, whole genome shotgun sequence (108309 bp)
Overview 1 RT 1: 42758-46266 bp Neighborhood of RT #1 [42758, 46277] HEAT CpeS RVT_N RVT-GII RVT-GII GIIM CpeS cyt_b559_alpha Feature: gene Location: 42758-43429 bp Feature: domain Description: HEAT Location: 42767-43412 bp Feature: domain Description: HEAT Location: 42767-4341 2 bp Feature: gene Location: 43568-43834 bp Feature: domain Description: CpeS Location: 43574-43802 bp Feature: domain Description: CpeS Location: 43574-43802 bp Feature: gene Location: 44358-45458 bp Feature: RT Description: RVT_N Location: 44394-44565 bp Feature: RT Description: RVT_N Location: 44394-44565 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 44586-44940 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 44586-44940 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 44940-45105 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 44940-451 05 bp Feature: domain Description: GIIM Note: maturase Location: 45165-45357 bp Feature: domain Description: GIIM Note: maturase Location: 451 65-45357 bp Feature: gene Location: 45621-45875 bp Feature: domain Description: CpeS Location: 45624-45822 bp Feature: domain Description: CpeS Location: 45624-45822 bp Feature: gene Location: 46029-46277 bp Feature: domain Description: cyt_b559_alpha Location: 46035-46266 bp Feature: domain Description: cyt_b559_alpha Location: 46035-46266 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HEAT (sd00044), CpeS (pfam09367), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), cyt_b559_alpha (TIGR01332)

Seq: ACYA01000092.1 Cylindrospermopsis raciborskii CS-505 CS505_91, whole genome shotgun sequence (10290 bp)
Overview 1 RT 1: 6141-10291 bp Neighborhood of RT #1 [6141, 10290] N_methyl Pilin_GH KOG0404 RVT_N RVT-GII GIIM KOG0404 TRX_NTR Feature: gene Location: 6141-6665 bp Feature: domain Description: N_methyl Location: 6201-6270 bp Feature: domain Description: N_methyl Location: 62 01-62 70 bp Feature: domain Description: Pilin_GH Location: 6306-6633 bp Feature: domain Description: Pilin_GH Location: 6306-6633 bp Feature: gene Location: 6900-7070 bp Feature: domain Description: KOG0404 Location: 6912-7059 bp Feature: domain Description: KOG0404 Location: 6912 -7059 bp Feature: gene Location: 7724-9289 bp Feature: RT Description: RVT_N Location: 7808-8021 bp Feature: RT Description: RVT_N Location: 7808-802 1 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8066-8687 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8066-8687 bp Feature: domain Description: GIIM Note: maturase Location: 8810-9032 bp Feature: domain Description: GIIM Note: maturase Location: 8810-9032 bp Feature: gene Location: 9355-10290 bp Feature: domain Description: KOG0404 Location: 9358-10090 bp Feature: domain Description: KOG0404 Location: 9358-10090 bp Feature: domain Description: TRX_NTR Location: 10210-10291 bp Feature: domain Description: TRX_NTR Location: 102 10-102 91 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT N_methyl (pfam07963), Pilin_GH (pfam16734), KOG0404 (KOG0404, Thioredoxin reductase ), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), TRX_NTR (cd02949)

Seq: ACYA01000001.1 Cylindrospermopsis raciborskii CS-505 CS505_1, whole genome shotgun sequence (212014 bp)
Overview 1 RT 1: 153574-158702 bp Neighborhood of RT #1 [153574, 158707] DUF3598 RTPR RVT-GII GIIM RNR_II_monomer Feature: gene Location: 153574-154428 bp Feature: domain Description: DUF3598 Location: 153583-154414 bp Feature: domain Description: DUF3 598 Location: 153 583 -154414 bp Feature: gene Location: 154458-156416 bp Feature: domain Description: RTPR Location: 154461-156390 bp Feature: domain Description: RTPR Location: 154461-1563 90 bp Feature: gene Location: 156597-157805 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 156744-157341 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 156744-1573 41 bp Feature: domain Description: GIIM Note: maturase Location: 157428-157662 bp Feature: domain Description: GIIM Note: maturase Location: 157428-157662 bp Feature: gene Location: 158166-158312 bp Feature: gene Location: 158444-158707 bp Feature: domain Description: RNR_II_monomer Location: 158507-158702 bp Feature: domain Description: RNR_II_monomer Location: 158507-158702 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF3598 (pfam12204), RTPR (TIGR02505), RVT-GII, GIIM (pfam08388), RNR_II_monomer (cd01676)

Seq: ACYA01000005.1 Cylindrospermopsis raciborskii CS-505 CS505_11, whole genome shotgun sequence (43501 bp)
Overview 1 RT 1: 16441-21408 bp Neighborhood of RT #1 [16441, 21584] MviM QueC RVT_N RVT-GII GIIM DUF3157 Feature: gene Location: 16441-17520 bp Feature: domain Description: MviM Location: 16507-17458 bp Feature: domain Description: MviM Location: 16507-174 58 bp Feature: gene Location: 17717-18385 bp Feature: domain Description: QueC Location: 17720-18377 bp Feature: domain Description: QueC Location: 17720-18377 bp Feature: gene Location: 18518-20218 bp Feature: RT Description: RVT_N Location: 18545-18755 bp Feature: RT Description: RVT_N Location: 1854 5-18755 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 18809-19490 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 18809-194 90 bp Feature: domain Description: GIIM Note: maturase Location: 19589-19823 bp Feature: domain Description: GIIM Note: maturase Location: 19589-19823 bp Feature: gene Location: 20365-20565 bp Feature: gene Location: 20880-21584 bp Feature: domain Description: DUF3157 Location: 21261-21408 bp Feature: domain Description: DUF3157 Location: 21261-214 08 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT MviM (COG0673), QueC (pfam06508), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), DUF3157 (pfam11355)