myRT

myRT report for GCA_000176095.1_ASM17609v1

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Seq: ACZG01000001.1 Legionella longbeachae D-4968 Cont_LLB_01, whole genome shotgun sequence (2518101 bp)
Overview 1 RT 1: 2047672-2052712 bp Neighborhood of RT #1 [2047672, 2052741] CAP_ED CPBP RVT-UNC PRK10060 Feature: gene Location: 2047672-2047857 bp Feature: gene Location: 2047870-2048982 bp Ori: EEZ96745.1 Feature: domain Description: CAP_ED Location: 2047909-2048209 bp Feature: domain Description: CAP_ED Location: 2047909-2048209 bp Feature: domain Description: CPBP Location: 2048689-2048935 bp Feature: domain Description: CPBP Location: 2048689-2048935 bp Feature: gene Location: 2048957-2050276 bp Ori: EEZ96746.1 Feature: RT Description: RVT-UNC Note: UNC RT Location: 2049128-2049764 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 20491 28-2049764 bp Feature: gene Location: 2050566-2051069 bp Feature: gene Location: 2051095-2052741 bp Ori: EEZ96748.1 Feature: domain Description: PRK10060 Location: 2051419-2052712 bp Feature: domain Description: PRK1 0060 Location: 2051 41 9-205271 2 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT CAP_ED (cl00047), CPBP, RVT-DGRs/RVT-UG26/RVT-CRISPR/RVT-UG27(RVT-UNC), PRK10060 (cyclic di-GMP phosphodiesterase)

Seq: ACZG01000002.1 Legionella longbeachae D-4968 Cont_LLB_02, whole genome shotgun sequence (1431070 bp)
Overview 1 RT 1: 932601-935575 bp 2 RT 2: 1204587-1211578 bp 3 RT 3: 1216851-1223051 bp Neighborhood of RT #1 [932601, 935595] RVT-UG18 ArsR Neighborhood of RT #2 [1204587, 1211748] MS_channel DDE_Tnp_1_3 RVT-UG18 SidC_N MFS_1 Neighborhood of RT #3 [1216851, 1223051] PRK13516 MhpC RVT-GII GIIM PRK13169 DDE_Tnp_IS66 Feature: gene Location: 932601-932783 bp Feature: gene Location: 933163-933345 bp Feature: gene Location: 933307-933744 bp Ori: EEZ94352.1 Feature: RT Description: RVT-UG18 Note: UG18 RT Location: 933505-933721 bp Feature: RT Description: RVT-UG18 Note: UG18 RT Location: 933505-93372 1 bp Feature: gene Location: 934093-935049 bp Feature: gene Location: 935296-935595 bp Ori: EEZ94354.1 Feature: domain Description: ArsR Location: 935308-935575 bp Feature: domain Description: ArsR Location: 935308-935575 bp Feature: gene Location: 1204587-1205645 bp Ori: EEZ94640.1 Feature: domain Description: MS_channel Location: 1204992-1205601 bp Feature: domain Description: MS_channel Location: 12 04992 -12 05601 bp Feature: gene Location: 1205718-1206611 bp Ori: EEZ94641.1 Feature: domain Description: DDE_Tnp_1_3 Location: 1206045-1206495 bp Feature: domain Description: DDE_Tnp_1_3 Location: 12 06045-12 06495 bp Feature: gene Location: 1206665-1207651 bp Ori: EEZ94642.1 Feature: RT Description: RVT-UG18 Note: UG18 RT Location: 1206950-1207532 bp Feature: RT Description: RVT-UG18 Note: UG18 RT Location: 12 06950-12 07532 bp Feature: gene Location: 1207918-1210329 bp Ori: EEZ94643.1 Feature: domain Description: SidC_N Location: 1207930-1209310 bp Feature: domain Description: SidC_N Location: 12 07930-12 09310 bp Feature: gene Location: 1210561-1211748 bp Ori: EEZ94644.1 Feature: domain Description: MFS_1 Location: 1210585-1211578 bp Feature: domain Description: MFS_1 Location: 12 10585-12 11578 bp Feature: gene Location: 1216851-1217963 bp Ori: EEZ94650.1 Feature: domain Description: PRK13516 Location: 1216854-1217958 bp Feature: domain Description: PRK13516 Location: 12 16854-12 17958 bp Feature: gene Location: 1218409-1219266 bp Ori: EEZ94651.1 Feature: domain Description: MhpC Location: 1218622-1219204 bp Feature: domain Description: MhpC Location: 12 1862 2 -12 192 04 bp Feature: gene Location: 1219839-1221173 bp Ori: EEZ94652.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1220124-1220811 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12 2 012 4-12 2 0811 bp Feature: domain Description: GIIM Note: maturase Location: 1220880-1221099 bp Feature: domain Description: GIIM Note: maturase Location: 12 2 0880-12 2 1099 bp Feature: gene Location: 1221487-1222299 bp Ori: EEZ94653.1 Feature: domain Description: PRK13169 Location: 1221520-1221694 bp Feature: domain Description: PRK13169 Location: 12 2 152 0-12 2 1694 bp Feature: domain Description: DDE_Tnp_IS66 Location: 1221985-1222240 bp Feature: domain Description: DDE_Tnp_IS66 Location: 12 2 1985-12 2 2 2 40 bp Feature: gene Location: 1222929-1223051 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG18, ArsR (pfam09824), MS_channel (pfam00924), DDE_Tnp_1_3 (pfam13612), SidC_N (pfam18219), MFS_1 (pfam07690), PRK13516 (gamma-glutamyl:cysteine ligase; Provisional), MhpC (COG0596), RVT-GII, GIIM (pfam08388)
PRK13169 (DNA replication initiation control protein YabA), DDE_Tnp_IS66 (pfam03050)

Seq: ACZG01000008.1 Legionella longbeachae D-4968 Cont_LLB_08, whole genome shotgun sequence (9756 bp)
Overview 1 RT 1: 5714-8452 bp Neighborhood of RT #1 [5714, 8469] PRK11768 RVT_N RVT-GII Feature: gene Location: 5714-6694 bp Ori: EEZ93369.1 Feature: domain Description: PRK11768 Location: 5726-6683 bp Feature: domain Description: PRK11768 Location: 5726-6683 bp Feature: gene Location: 7040-7153 bp Feature: gene Location: 7609-8469 bp Ori: EEZ93371.1 Feature: domain Description: RVT_N Location: 7660-7903 bp Feature: domain Description: RVT_N Location: 7660-7903 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7948-8452 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7948-8452 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK11768 (serine/threonine protein kinase), RVT_N (pfam13655), RVT-GII