myRT

myRT report for GCA_000176655.2_ASM17665v2

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Seq: GL884334.1 Escherichia coli TA280 genomic scaffold supercont1.3, whole genome shotgun sequence (478745 bp)
Overview 1 RT 1: 36998-46324 bp Neighborhood of RT #1 [36998, 46326] PAAR_RHS YD_repeat_2x YD_repeat_2x RhsA RVT-GII GIIM PRK10438 PRK09993 Feature: gene Location: 36998-41131 bp Feature: domain Description: PAAR_RHS Location: 37007-37442 bp Feature: domain Description: PAAR_RHS Location: 37007-37442 bp Feature: domain Description: YD_repeat_2x Location: 38228-38279 bp Feature: domain Description: YD_repeat_2x Location: 38228-38279 bp Feature: domain Description: YD_repeat_2x Location: 38513-38612 bp Feature: domain Description: YD_repeat_2x Location: 3851 3-3861 2 bp Feature: domain Description: RhsA Location: 38630-40751 bp Feature: domain Description: RhsA Location: 38630-40751 bp Feature: gene Location: 41128-41595 bp Feature: gene Location: 42223-43545 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 42499-43156 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 42499-431 56 bp Feature: domain Description: GIIM Note: maturase Location: 43246-43450 bp Feature: domain Description: GIIM Note: maturase Location: 43246-43450 bp Feature: gene Location: 44929-45699 bp Feature: domain Description: PRK10438 Location: 44932-45694 bp Feature: domain Description: PRK1 0438 Location: 44932-45694 bp Feature: gene Location: 45853-46326 bp Feature: domain Description: PRK09993 Location: 45868-46324 bp Feature: domain Description: PRK09993 Location: 45868-46324 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PAAR_RHS (cd14742), YD_repeat_2x (TIGR01643), RhsA (COG3209), RVT-GII, GIIM (pfam08388), PRK10438 (C-N hydrolase family amidase; Provisional), PRK09993 (C-lysozyme inhibitor; Provisional)