myRT

myRT report for GCA_000176675.2_ASM17667v2

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Seq: GL884455.1 Escherichia coli H591 genomic scaffold supercont1.48, whole genome shotgun sequence (1239129 bp)
Overview 1 RT 1: 661227-669922 bp Neighborhood of RT #1 [661227, 670812] P Q RVT-Retrons RVT-AbiP2 Phage_GPA Feature: gene Location: 661227-662999 bp Ori: EGI45801.1 Feature: domain Description: P Location: 661254-662985 bp Feature: domain Description: P Location: 661 254-662985 bp Feature: gene Location: 662999-664018 bp Ori: EGI45802.1 Feature: domain Description: Q Location: 663002-664013 bp Feature: domain Description: Q Location: 663002-66401 3 bp Feature: gene Location: 664764-665948 bp Ori: EGI45803.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 664908-665490 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 664908-665490 bp Feature: gene Location: 666013-666129 bp Feature: gene Location: 666379-667893 bp Ori: EGI45805.1 Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 666922-667375 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 666922-667375 bp Feature: gene Location: 668214-668432 bp Feature: gene Location: 668536-670812 bp Ori: EGI45807.1 Feature: domain Description: Phage_GPA Location: 668935-669922 bp Feature: domain Description: Phage_GPA Location: 668935-669922 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT P (PHA02535), Q (PHA02536), RVT-Retrons, RVT-AbiP2, Phage_GPA (pfam05840)

Seq: GL884412.1 Escherichia coli H591 genomic scaffold supercont1.5, whole genome shotgun sequence (93003 bp)
Overview 1 RT 1: 34581-40252 bp Neighborhood of RT #1 [34581, 40275] PhoX PHA02517 RVT-GII GIIM PHA02517 HTH_23 InsE Feature: gene Location: 34581-36560 bp Ori: EGI47839.1 Feature: domain Description: PhoX Location: 34632-36555 bp Feature: domain Description: PhoX Location: 34632 -36555 bp Feature: gene Location: 36757-36969 bp Ori: EGI47840.1 Feature: domain Description: PHA02517 Location: 36760-36904 bp Feature: domain Description: PHA02 517 Location: 36760-36904 bp Feature: gene Location: 37561-39084 bp Ori: EGI47841.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 37834-38566 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 37834-38566 bp Feature: domain Description: GIIM Note: maturase Location: 38641-38839 bp Feature: domain Description: GIIM Note: maturase Location: 38641-38839 bp Feature: gene Location: 39201-39647 bp Ori: EGI47842.1 Feature: domain Description: PHA02517 Location: 39204-39645 bp Feature: domain Description: PHA02 517 Location: 392 04-39645 bp Feature: gene Location: 39613-40275 bp Ori: EGI47843.1 Feature: domain Description: HTH_23 Location: 39697-39775 bp Feature: domain Description: HTH_2 3 Location: 39697-39775 bp Feature: domain Description: InsE Location: 39904-40252 bp Feature: domain Description: InsE Location: 39904-402 52 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PhoX (COG3211), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), HTH_23 (pfam13384), InsE (COG2963)