myRT

myRT report for GCA_000176895.2_ASM17689v2

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Seq: CAFN01000677.1 Arthrospira sp. PCC 8005, WGS project CAFN00000000 data, strain PCC 8005, Contig4292-2130, whole genome shotgun sequence (57732 bp)
Overview 1 RT 1: 10-1006 bp Neighborhood of RT #1 [10, 1006] RVT_N RVT-GII RVT_N Feature: gene Location: 10-729 bp Ori: CCE20504.1 Feature: domain Description: RVT_N Location: 49-130 bp Feature: domain Description: RVT_N Location: 49-1 30 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 175-724 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 75-724 bp Feature: gene Location: 751-975 bp Ori: CCE20505.1 Feature: domain Description: RVT_N Location: 820-970 bp Feature: domain Description: RVT_N Location: 820-970 bp Feature: gene Location: 836-1006 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII

Seq: CAFN01000020.1 Arthrospira sp. PCC 8005, WGS project CAFN00000000 data, strain PCC 8005, Contig4874-2130, whole genome shotgun sequence (27636 bp)
Overview 1 RT 1: 256-6338 bp Neighborhood of RT #1 [256, 6349] DDE_3 WcaA TPR TPR RVT_N RVT-GII GIIM argC Usp Usp Feature: gene Location: 256-852 bp Ori: CCE15587.1 Feature: domain Description: DDE_3 Location: 406-826 bp Feature: domain Description: DDE_3 Location: 406-82 6 bp Feature: gene Location: 1119-2312 bp Ori: CCE15588.1 Feature: domain Description: WcaA Location: 1122-1533 bp Feature: domain Description: WcaA Location: 112 2 -1533 bp Feature: domain Description: TPR Location: 1653-1920 bp Feature: domain Description: TPR Location: 1653-192 0 bp Feature: domain Description: TPR Location: 1956-2235 bp Feature: domain Description: TPR Location: 1956-2 2 35 bp Feature: gene Location: 3158-4294 bp Ori: CCE15589.1 Feature: domain Description: RVT_N Location: 3230-3344 bp Feature: domain Description: RVT_N Location: 32 30-3344 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3692-3902 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3692 -3902 bp Feature: domain Description: GIIM Note: maturase Location: 3989-4214 bp Feature: domain Description: GIIM Note: maturase Location: 3989-42 14 bp Feature: gene Location: 4443-5450 bp Ori: CCE15590.1 Gene: argC Feature: domain Description: argC Location: 4449-5448 bp Feature: domain Description: argC Location: 4449-5448 bp Feature: gene Location: 5498-6349 bp Ori: CCE15591.1 Feature: domain Description: Usp Location: 5501-5894 bp Feature: domain Description: Usp Location: 5501-5894 bp Feature: domain Description: Usp Location: 5921-6338 bp Feature: domain Description: Usp Location: 592 1-6338 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_3 (pfam13358), WcaA (TIGR04017), TPR (smart00028), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), argC (TIGR01850), Usp (pfam00582)

Seq: CAFN01000657.1 Arthrospira sp. PCC 8005, WGS project CAFN00000000 data, strain PCC 8005, Contig02795-2130, whole genome shotgun sequence (1550 bp)
Overview 1 RT 1: 662-1335 bp Neighborhood of RT #1 [662, 1340] RVT-GII RVT_N RVT_N Feature: gene Location: 662-991 bp Ori: CCE19827.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 743-947 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 743 -947 bp Feature: gene Location: 873-1094 bp Ori: CCE19828.1 Feature: domain Description: RVT_N Location: 912-993 bp Feature: domain Description: RVT_N Location: 912-993 bp Feature: gene Location: 1116-1340 bp Ori: CCE19829.1 Feature: domain Description: RVT_N Location: 1185-1335 bp Feature: domain Description: RVT_N Location: 1185-13 3 5 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, RVT_N (pfam13655)

Seq: CAFN01000297.1 Arthrospira sp. PCC 8005, WGS project CAFN00000000 data, strain PCC 8005, Contig00751-2130, whole genome shotgun sequence (2262 bp)
Overview 1 RT 1: 296-2119 bp Neighborhood of RT #1 [296, 2145] RVT-GII GIIM HNHc ParE_toxin Feature: gene Location: 296-1312 bp Ori: CCE18308.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 329-554 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 329-554 bp Feature: domain Description: GIIM Note: maturase Location: 659-860 bp Feature: domain Description: GIIM Note: maturase Location: 659-860 bp Feature: domain Description: HNHc Note: nucleases Location: 1094-1259 bp Feature: domain Description: HNHc Note: nucleases Location: 1094 -1259 bp Feature: gene Location: 1601-1858 bp Feature: gene Location: 1843-2145 bp Ori: CCE18310.1 Feature: domain Description: ParE_toxin Location: 1858-2119 bp Feature: domain Description: ParE_toxin Location: 1858-2119 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), HNHc (smart00507), ParE_toxin (pfam05016)

Seq: CAFN01000047.1 Arthrospira sp. PCC 8005, WGS project CAFN00000000 data, strain PCC 8005, Contig3897-2130, whole genome shotgun sequence (126399 bp)
Overview 1 RT 1: 84437-89104 bp 2 RT 2: 95604-100166 bp Neighborhood of RT #1 [84437, 89104] DUF2973 DUF2605 RVT_N RVT-GII GIIM McrA Neighborhood of RT #2 [95604, 100192] RVT_N RVT-GII RVT-GII GIIM HNHc ParE_toxin Feature: gene Location: 84437-84748 bp Ori: CCE16244.1 Feature: domain Description: DUF2973 Location: 84440-84659 bp Feature: domain Description: DUF2973 Location: 84440-8465 9 bp Feature: gene Location: 84943-85284 bp Ori: CCE16245.1 Feature: domain Description: DUF2605 Location: 84964-85243 bp Feature: domain Description: DUF2605 Location: 84964-85 243 bp Feature: gene Location: 85334-87037 bp Ori: CCE16246.1 Feature: domain Description: RVT_N Location: 85373-85454 bp Feature: domain Description: RVT_N Location: 85 373-85 45 4 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 85499-86168 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 85 499-86168 bp Feature: domain Description: GIIM Note: maturase Location: 86279-86486 bp Feature: domain Description: GIIM Note: maturase Location: 86279-86486 bp Feature: domain Description: McrA Location: 86651-86900 bp Feature: domain Description: McrA Location: 8665 1-86900 bp Feature: gene Location: 88356-88496 bp Feature: gene Location: 88937-89104 bp Feature: gene Location: 95604-95912 bp Feature: gene Location: 96082-96303 bp Ori: CCE16258.1 Feature: domain Description: RVT_N Location: 96148-96298 bp Feature: domain Description: RVT_N Location: 96148-96298 bp Feature: gene Location: 96559-96729 bp Ori: CCE16259.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 96562-96703 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 965 62-96703 bp Feature: gene Location: 97442-97621 bp Feature: gene Location: 97807-97998 bp Feature: gene Location: 98343-99359 bp Ori: CCE16262.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 98376-98601 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 98376-98601 bp Feature: domain Description: GIIM Note: maturase Location: 98706-98907 bp Feature: domain Description: GIIM Note: maturase Location: 98706-98907 bp Feature: domain Description: HNHc Note: nucleases Location: 99141-99306 bp Feature: domain Description: HNHc Note: nucleases Location: 99141-99306 bp Feature: gene Location: 99648-99905 bp Feature: gene Location: 99890-100192 bp Ori: CCE16264.1 Feature: domain Description: ParE_toxin Location: 99905-100166 bp Feature: domain Description: ParE_toxin Location: 99905 -100166 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF2973 (pfam11189), DUF2605 (pfam10792), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), McrA (COG4058), HNHc (smart00507), ParE_toxin (pfam05016)

Seq: CAFN01000114.1 Arthrospira sp. PCC 8005, WGS project CAFN00000000 data, strain PCC 8005, Contig00104-2130, whole genome shotgun sequence (2938 bp)
Overview 1 RT 1: 20-1901 bp Neighborhood of RT #1 [20, 1918] RVT-GII GIIM RVT_N RVT-GII Feature: gene Location: 20-271 bp Feature: gene Location: 514-1329 bp Ori: CCE17679.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 517-946 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 517-946 bp Feature: domain Description: GIIM Note: maturase Location: 1081-1303 bp Feature: domain Description: GIIM Note: maturase Location: 1081-1303 bp Feature: gene Location: 1319-1918 bp Ori: CCE17680.1 Feature: domain Description: RVT_N Location: 1385-1628 bp Feature: domain Description: RVT_N Location: 1385-16 28 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1673-1901 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 16 73-1901 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), RVT_N (pfam13655)

Seq: CAFN01000011.1 Arthrospira sp. PCC 8005, WGS project CAFN00000000 data, strain PCC 8005, Contig4849-2130, whole genome shotgun sequence (29039 bp)
Overview 1 RT 1: 22484-28739 bp Neighborhood of RT #1 [22484, 28780] Glyco_tranf_GTA_type Glyco_tranf_GTA_type GT4_PimA-like COG3415 DDE_3 RVT-GII GIIM McrA Feature: gene Location: 22484-25957 bp Ori: CCE15296.1 Feature: domain Description: Glyco_tranf_GTA_type Location: 22520-23060 bp Feature: domain Description: Glyco_tranf_GTA_type Location: 22520-23060 bp Feature: domain Description: Glyco_tranf_GTA_type Location: 23489-24032 bp Feature: domain Description: Glyco_tranf_GTA_type Location: 23489-24032 bp Feature: domain Description: GT4_PimA-like Location: 24497-25652 bp Feature: domain Description: GT4_PimA-like Location: 24497 -25652 bp Feature: gene Location: 26779-27591 bp Ori: CCE15297.1 Feature: domain Description: COG3415 Location: 26782-27097 bp Feature: domain Description: COG3415 Location: 267 82-27 097 bp Feature: domain Description: DDE_3 Location: 27133-27553 bp Feature: domain Description: DDE_3 Location: 27 133-27 553 bp Feature: gene Location: 27677-28780 bp Ori: CCE15298.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 27716-28007 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 27 7 16-28007 bp Feature: domain Description: GIIM Note: maturase Location: 28115-28322 bp Feature: domain Description: GIIM Note: maturase Location: 28115-28322 bp Feature: domain Description: McrA Location: 28478-28739 bp Feature: domain Description: McrA Location: 2847 8-287 39 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Glyco_tranf_GTA_type (cl11394), GT4_PimA-like (cd03801), COG3415 (Transposase ), DDE_3 (pfam13358), RVT-GII, GIIM (pfam08388), McrA (COG4058)

Seq: CAFN01000679.1 Arthrospira sp. PCC 8005, WGS project CAFN00000000 data, strain PCC 8005, Contig4957-2130, whole genome shotgun sequence (60780 bp)
Overview 1 RT 1: 38521-43508 bp Neighborhood of RT #1 [38521, 43537] MFS_MefA_like RVT_N RVT-GII GIIM HNHc secG COG5549 Feature: gene Location: 38521-40104 bp Ori: CCE20603.1 Feature: domain Description: MFS_MefA_like Location: 38866-40081 bp Feature: domain Description: MFS_MefA_like Location: 38 8 66-4008 1 bp Feature: gene Location: 40154-40429 bp Feature: gene Location: 40712-42475 bp Ori: CCE20605.1 Feature: domain Description: RVT_N Location: 40778-41021 bp Feature: domain Description: RVT_N Location: 40778 -41021 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 41066-41735 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 41066-41735 bp Feature: domain Description: GIIM Note: maturase Location: 41840-42047 bp Feature: domain Description: GIIM Note: maturase Location: 418 40-42047 bp Feature: domain Description: HNHc Note: nucleases Location: 42284-42443 bp Feature: domain Description: HNHc Note: nucleases Location: 4228 4-42443 bp Feature: gene Location: 42600-42830 bp Ori: CCE20606.1 Gene: secG Feature: domain Description: secG Location: 42615-42816 bp Feature: domain Description: secG Location: 42615-428 16 bp Feature: gene Location: 42836-43537 bp Ori: CCE20607.1 Feature: domain Description: COG5549 Location: 42938-43508 bp Feature: domain Description: COG5549 Location: 42938 -43508 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT MFS_MefA_like (cd06173), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507), secG (TIGR00810), COG5549 (Predicted Zn-dependent protease )

Seq: CAFN01000010.1 Arthrospira sp. PCC 8005, WGS project CAFN00000000 data, strain PCC 8005, Contig4847-2130, whole genome shotgun sequence (12429 bp)
Overview 1 RT 1: 58-6971 bp Neighborhood of RT #1 [58, 6985] COG3415 DDE_3 RVT_N RVT-GII RVT-GII group_II_RT_mat PRK12309 Crp Feature: gene Location: 58-285 bp Feature: gene Location: 631-1506 bp Ori: CCE15272.1 Feature: domain Description: COG3415 Location: 640-979 bp Feature: domain Description: COG3415 Location: 640-9 79 bp Feature: domain Description: DDE_3 Location: 1048-1468 bp Feature: domain Description: DDE_3 Location: 1048-1468 bp Feature: gene Location: 2641-3225 bp Ori: CCE15273.1 Feature: domain Description: RVT_N Location: 2683-2923 bp Feature: domain Description: RVT_N Location: 2683-29 23 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2968-3178 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 29 68-3178 bp Feature: gene Location: 4159-5181 bp Ori: CCE15274.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4162-4513 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4162-4513 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 4576-4837 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 4576-4837 bp Feature: gene Location: 5390-6376 bp Ori: CCE15275.1 Gene: talB Feature: domain Description: PRK12309 Location: 5393-6371 bp Feature: domain Description: PRK12309 Location: 539 3-6371 bp Feature: gene Location: 6617-6985 bp Ori: CCE15276.1 Feature: domain Description: Crp Location: 6653-6971 bp Feature: domain Description: Crp Location: 6653-69 71 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG3415 (Transposase ), DDE_3 (pfam13358), RVT_N (pfam13655), RVT-GII, group_II_RT_mat (TIGR04416), PRK12309 (transaldolase), Crp (pfam00325)

Seq: CAFN01000093.1 Arthrospira sp. PCC 8005, WGS project CAFN00000000 data, strain PCC 8005, Contig00048-2130, whole genome shotgun sequence (694 bp)
Overview 1 RT 1: 19-377 bp Neighborhood of RT #1 [19, 421] RVT_N RVT-GII Feature: gene Location: 19-231 bp Ori: CCE17557.1 Feature: domain Description: RVT_N Location: 22-109 bp Feature: domain Description: RVT_N Location: 22-10 9 bp Feature: gene Location: 170-421 bp Ori: CCE17558.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 176-377 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 176-377 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII

Seq: CAFN01000036.1 Arthrospira sp. PCC 8005, WGS project CAFN00000000 data, strain PCC 8005, Contig3819-2130, whole genome shotgun sequence (53153 bp)
Overview 1 RT 1: 75-4137 bp Neighborhood of RT #1 [75, 4137] DDE_3 RVT_N RVT-GII GIIM Feature: gene Location: 75-347 bp Ori: CCE15938.1 Feature: domain Description: DDE_3 Location: 81-309 bp Feature: domain Description: DDE_3 Location: 81-309 bp Feature: gene Location: 843-2333 bp Ori: CCE15939.1 Feature: domain Description: RVT_N Location: 897-1140 bp Feature: domain Description: RVT_N Location: 897-11 40 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1191-1869 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11 91-1869 bp Feature: domain Description: GIIM Note: maturase Location: 1923-2157 bp Feature: domain Description: GIIM Note: maturase Location: 1923-2157 bp Feature: gene Location: 3042-3158 bp Feature: gene Location: 3946-4137 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_3 (pfam13358), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)

Seq: CAFN01000501.1 Arthrospira sp. PCC 8005, WGS project CAFN00000000 data, strain PCC 8005, Contig4120-2130, whole genome shotgun sequence (26330 bp)
Overview 1 RT 1: 14049-22911 bp Neighborhood of RT #1 [14049, 22991] PRK07459 RVT_N RVT-GII GIIM NAD_bind_1_Glu_DH Lys9 NACHT Pentapeptide WD40 WD40 WD40 WD40 WD40 Feature: gene Location: 14049-14585 bp Feature: gene Location: 14683-14958 bp Ori: CCE19013.1 Gene: ssb Feature: domain Description: PRK07459 Location: 14686-14938 bp Feature: domain Description: PRK07459 Location: 14686-14938 bp Feature: gene Location: 15198-16706 bp Ori: CCE19014.1 Feature: domain Description: RVT_N Location: 15228-15474 bp Feature: domain Description: RVT_N Location: 15228-15474 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 15516-16176 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 15516-16176 bp Feature: domain Description: GIIM Note: maturase Location: 16278-16515 bp Feature: domain Description: GIIM Note: maturase Location: 16278-16515 bp Feature: gene Location: 17475-18509 bp Ori: CCE19015.1 Feature: domain Description: NAD_bind_1_Glu_DH Location: 17541-17742 bp Feature: domain Description: NAD_bind_1_Glu_DH Location: 17541-17742 bp Feature: domain Description: Lys9 Location: 17775-18057 bp Feature: domain Description: Lys9 Location: 17775-18057 bp Feature: gene Location: 18747-22991 bp Ori: CCE19016.1 Feature: domain Description: NACHT Location: 19581-20103 bp Feature: domain Description: NACHT Location: 19581-20103 bp Feature: domain Description: Pentapeptide Location: 20970-21075 bp Feature: domain Description: Pentapeptide Location: 20970-21075 bp Feature: domain Description: WD40 Location: 21081-21969 bp Feature: domain Description: WD40 Location: 21081-21969 bp Feature: domain Description: WD40 Location: 22002-22104 bp Feature: domain Description: WD40 Location: 22002-22104 bp Feature: domain Description: WD40 Location: 22113-22230 bp Feature: domain Description: WD40 Location: 22113-22230 bp Feature: domain Description: WD40 Location: 22245-22356 bp Feature: domain Description: WD40 Location: 22245-22356 bp Feature: domain Description: WD40 Location: 22416-22911 bp Feature: domain Description: WD40 Location: 22416-22911 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK07459 (single-stranded DNA-binding protein; Provisional), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), NAD_bind_1_Glu_DH (cd01076), Lys9 (COG1748), NACHT (pfam05729), Pentapeptide (pfam00805), WD40 (smart00320)

Seq: CAFN01000689.1 Arthrospira sp. PCC 8005, WGS project CAFN00000000 data, strain PCC 8005, Contig4208-2130, whole genome shotgun sequence (32903 bp)
Overview 1 RT 1: 12835-16629 bp Neighborhood of RT #1 [12835, 16640] InsQ RVT-GII GIIM HNHc Usp Fdx Feature: gene Location: 12835-13065 bp Ori: CCE20846.1 Feature: domain Description: InsQ Location: 12841-12994 bp Feature: domain Description: InsQ Location: 12841-12994 bp Feature: gene Location: 13303-13431 bp Feature: gene Location: 14296-15486 bp Ori: CCE20848.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14299-14728 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14299-14728 bp Feature: domain Description: GIIM Note: maturase Location: 14833-15040 bp Feature: domain Description: GIIM Note: maturase Location: 14833-15040 bp Feature: domain Description: HNHc Note: nucleases Location: 15277-15418 bp Feature: domain Description: HNHc Note: nucleases Location: 15277-15418 bp Feature: gene Location: 15789-16265 bp Ori: CCE20849.1 Feature: domain Description: Usp Location: 15798-16245 bp Feature: domain Description: Usp Location: 15798-16245 bp Feature: gene Location: 16341-16640 bp Ori: CCE20850.1 Gene: fdx Feature: domain Description: Fdx Location: 16350-16629 bp Feature: domain Description: Fdx Location: 16350-16629 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsQ (COG0675), RVT-GII, GIIM (pfam08388), HNHc (smart00507), Usp (pfam00582), Fdx (COG0633)

Seq: CAFN01000083.1 Arthrospira sp. PCC 8005, WGS project CAFN00000000 data, strain PCC 8005, Contig00030-2130, whole genome shotgun sequence (2647 bp)
Overview 1 RT 1: 1564-2575 bp Neighborhood of RT #1 [1564, 2586] RVT-GII GIIM Feature: gene Location: 1564-1650 bp Feature: gene Location: 1717-1941 bp Feature: gene Location: 2005-2586 bp Ori: CCE17535.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2035-2260 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2035-2260 bp Feature: domain Description: GIIM Note: maturase Location: 2383-2575 bp Feature: domain Description: GIIM Note: maturase Location: 2383-2575 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: CAFN01000307.1 Arthrospira sp. PCC 8005, WGS project CAFN00000000 data, strain PCC 8005, Contig00784-2130, whole genome shotgun sequence (1681 bp)
Overview 1 RT 1: 1224-1617 bp Neighborhood of RT #1 [1224, 1634] RVT_N RVT-GII Feature: gene Location: 1224-1634 bp Ori: CCE18369.1 Feature: domain Description: RVT_N Location: 1263-1344 bp Feature: domain Description: RVT_N Location: 1263-1344 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1389-1617 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1389-1617 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII

Seq: CAFN01000268.1 Arthrospira sp. PCC 8005, WGS project CAFN00000000 data, strain PCC 8005, Contig4548-2130, whole genome shotgun sequence (33554 bp)
Overview 1 RT 1: 1210-5114 bp Neighborhood of RT #1 [1210, 5114] STKc_PknB_like YfmG Avd_like RVT-DGRs YfmG Feature: gene Location: 1210-2949 bp Ori: CCE18231.1 Feature: domain Description: STKc_PknB_like Location: 1249-2017 bp Feature: domain Description: STKc_PknB_like Location: 1249-2017 bp Feature: domain Description: YfmG Location: 2128-2929 bp Feature: domain Description: YfmG Location: 2128-2929 bp Feature: gene Location: 3104-3451 bp Ori: CCE18232.1 Feature: domain Description: Avd_like Location: 3128-3434 bp Feature: domain Description: Avd_like Location: 3128-3434 bp Feature: gene Location: 3462-4520 bp Ori: CCE18233.1 Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 3672-4314 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 3672-4314 bp Feature: gene Location: 4543-4791 bp Ori: CCE18234.1 Feature: domain Description: YfmG Location: 4546-4657 bp Feature: domain Description: YfmG Location: 4546-4657 bp Feature: gene Location: 4953-5114 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT STKc_PknB_like (cd14014), YfmG (COG1262), Avd_like (cd16376), RVT-DGRs

Seq: CAFN01000052.1 Arthrospira sp. PCC 8005, WGS project CAFN00000000 data, strain PCC 8005, Contig3966-2130, whole genome shotgun sequence (96140 bp)
Overview 1 RT 1: 30281-38878 bp 2 RT 2: 85829-93430 bp Neighborhood of RT #1 [30281, 39018] DUF1565 DUF1565 SLH SLH SLH HNH RVT_N RVT-GII GIIM PitA HemH Neighborhood of RT #2 [85829, 93430] STKc_PknB_like YfmG McrA RVT-GII RVT_N RVT-GII Feature: gene Location: 30281-32716 bp Ori: CCE16572.1 Feature: domain Description: DUF1565 Location: 30311-31103 bp Feature: domain Description: DUF1565 Location: 30311-31103 bp Feature: domain Description: DUF1565 Location: 31193-31994 bp Feature: domain Description: DUF1565 Location: 31193-31994 bp Feature: domain Description: SLH Location: 32150-32270 bp Feature: domain Description: SLH Location: 32150-32270 bp Feature: domain Description: SLH Location: 32330-32453 bp Feature: domain Description: SLH Location: 32330-32453 bp Feature: domain Description: SLH Location: 32516-32642 bp Feature: domain Description: SLH Location: 32516-32642 bp Feature: gene Location: 32943-33431 bp Ori: CCE16573.1 Feature: domain Description: HNH Note: nucleases Location: 33249-33384 bp Feature: domain Description: HNH Note: nucleases Location: 33249-33384 bp Feature: gene Location: 34341-35669 bp Ori: CCE16574.1 Feature: domain Description: RVT_N Location: 34407-34650 bp Feature: domain Description: RVT_N Location: 34407-34650 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 34695-35364 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 34695-35364 bp Feature: domain Description: GIIM Note: maturase Location: 35499-35661 bp Feature: domain Description: GIIM Note: maturase Location: 35499-35661 bp Feature: gene Location: 36436-37701 bp Ori: CCE16575.1 Feature: domain Description: PitA Location: 36469-37690 bp Feature: domain Description: PitA Location: 36469-37690 bp Feature: gene Location: 37828-39018 bp Ori: CCE16576.1 Feature: domain Description: HemH Location: 37894-38878 bp Feature: domain Description: HemH Location: 37894-38878 bp Feature: gene Location: 85829-87460 bp Ori: CCE16615.1 Feature: domain Description: STKc_PknB_like Location: 85847-86546 bp Feature: domain Description: STKc_PknB_like Location: 85847-86546 bp Feature: domain Description: YfmG Location: 86591-87455 bp Feature: domain Description: YfmG Location: 86591-87455 bp Feature: gene Location: 87675-88163 bp Ori: CCE16616.1 Feature: domain Description: McrA Location: 87846-88137 bp Feature: domain Description: McrA Location: 87846-88137 bp Feature: gene Location: 88440-88784 bp Ori: CCE16617.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 88443-88782 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 88443-88782 bp Feature: gene Location: 88855-89427 bp Ori: CCE16618.1 Feature: domain Description: RVT_N Location: 88894-89137 bp Feature: domain Description: RVT_N Location: 88894-89137 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 89182-89410 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 89182-89410 bp Feature: gene Location: 90250-91653 bp Feature: gene Location: 91973-93430 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF1565 (pfam07602), SLH (pfam00395), HNH (pfam01844), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), PitA (COG0306), HemH (COG0276), STKc_PknB_like (cd14014), YfmG (COG1262)
McrA (COG4058)

Seq: CAFN01000296.1 Arthrospira sp. PCC 8005, WGS project CAFN00000000 data, strain PCC 8005, Contig00750-2130, whole genome shotgun sequence (1294 bp)
Overview 1 RT 1: 53-768 bp Neighborhood of RT #1 [53, 794] RVT_N RVT-GII Feature: gene Location: 53-205 bp Feature: gene Location: 147-368 bp Ori: CCE18306.1 Feature: domain Description: RVT_N Location: 213-363 bp Feature: domain Description: RVT_N Location: 213-363 bp Feature: gene Location: 624-794 bp Ori: CCE18307.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 627-768 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 627-768 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII

Seq: CAFN01000658.1 Arthrospira sp. PCC 8005, WGS project CAFN00000000 data, strain PCC 8005, Contig02961-2130, whole genome shotgun sequence (899 bp)
Overview 1 RT 1: 166-566 bp Neighborhood of RT #1 [166, 566] RVT-GII Feature: gene Location: 166-363 bp Ori: CCE19830.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 169-289 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 169-289 bp Feature: gene Location: 411-566 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: CAFN01000021.1 Arthrospira sp. PCC 8005, WGS project CAFN00000000 data, strain PCC 8005, Contig4877-2130, whole genome shotgun sequence (40938 bp)
Overview 1 RT 1: 20585-26751 bp Neighborhood of RT #1 [20585, 26822] YjbI Pentapeptide RVT-CRISPR Cas1_I-II-III Cas1_I-II-III Cas1_I-II-III Cas2_I_II_III Feature: gene Location: 20585-21361 bp Feature: gene Location: 21422-22048 bp Ori: CCE15637.1 Feature: domain Description: YjbI Location: 21473-21746 bp Feature: domain Description: YjbI Location: 21473-21746 bp Feature: domain Description: Pentapeptide Location: 21836-21935 bp Feature: domain Description: Pentapeptide Location: 21836-21935 bp Feature: gene Location: 23426-25390 bp Ori: CCE15638.1 Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 23609-24212 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 23609-24212 bp Feature: domain Description: Cas1_I-II-III Location: 24392-25349 bp Feature: domain Description: Cas1_I-II-III Location: 24392-25349 bp Feature: gene Location: 25615-26511 bp Ori: CCE15639.1 Feature: domain Description: Cas1_I-II-III Location: 25627-25984 bp Feature: domain Description: Cas1_I-II-III Location: 25627-25984 bp Feature: domain Description: Cas1_I-II-III Location: 26137-26473 bp Feature: domain Description: Cas1_I-II-III Location: 26137-26473 bp Feature: gene Location: 26508-26822 bp Ori: CCE15640.1 Feature: domain Description: Cas2_I_II_III Location: 26520-26751 bp Feature: domain Description: Cas2_I_II_III Location: 26520 -26751 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YjbI (COG2346), Pentapeptide (pfam00805), RVT-CRISPR, Cas1_I-II-III (cl00656), Cas2_I_II_III (cl11442)

Seq: CAFN01000092.1 Arthrospira sp. PCC 8005, WGS project CAFN00000000 data, strain PCC 8005, Contig00047-2130, whole genome shotgun sequence (3957 bp)
Overview 1 RT 1: 973-3398 bp Neighborhood of RT #1 [973, 3406] RVT_N RVT-GII RVT-GII GIIM Feature: gene Location: 973-1146 bp Feature: gene Location: 1170-1283 bp Feature: gene Location: 1222-1818 bp Ori: CCE17554.1 Feature: domain Description: RVT_N Location: 1291-1534 bp Feature: domain Description: RVT_N Location: 1291-1534 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1579-1792 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1579-1792 bp Feature: gene Location: 2434-2661 bp Feature: gene Location: 2681-3406 bp Ori: CCE17556.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2684-3113 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2684-3113 bp Feature: domain Description: GIIM Note: maturase Location: 3218-3398 bp Feature: domain Description: GIIM Note: maturase Location: 321 8-3398 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)

Seq: CAFN01000609.1 Arthrospira sp. PCC 8005, WGS project CAFN00000000 data, strain PCC 8005, Contig01936-2130, whole genome shotgun sequence (2205 bp)
Overview 1 RT 1: 143-2149 bp Neighborhood of RT #1 [143, 2149] RVT-GII RVT-GII GIIM HNHc Feature: gene Location: 143-433 bp Ori: CCE19509.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 251-416 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 251-416 bp Feature: gene Location: 481-1734 bp Ori: CCE19510.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 529-976 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 529-976 bp Feature: domain Description: GIIM Note: maturase Location: 1081-1282 bp Feature: domain Description: GIIM Note: maturase Location: 1081-1282 bp Feature: domain Description: HNHc Note: nucleases Location: 1525-1672 bp Feature: domain Description: HNHc Note: nucleases Location: 1525-1672 bp Feature: gene Location: 1757-1954 bp Feature: gene Location: 1916-2149 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), HNHc (smart00507)

Seq: CAFN01000277.1 Arthrospira sp. PCC 8005, WGS project CAFN00000000 data, strain PCC 8005, Contig00594-2130, whole genome shotgun sequence (1637 bp)
Overview 1 RT 1: 840-1429 bp Neighborhood of RT #1 [840, 1608] RVT-GII DDE_Tnp_1 Feature: gene Location: 840-1070 bp Ori: CCE18264.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 846-1053 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 846-1053 bp Feature: gene Location: 1141-1608 bp Ori: CCE18265.1 Feature: domain Description: DDE_Tnp_1 Location: 1297-1429 bp Feature: domain Description: DDE_Tnp_1 Location: 1297-1429 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, DDE_Tnp_1 (pfam01609)

Seq: CAFN01000584.1 Arthrospira sp. PCC 8005, WGS project CAFN00000000 data, strain PCC 8005, Contig01719-2130, whole genome shotgun sequence (748 bp)
Overview 1 RT 1: 26-482 bp Neighborhood of RT #1 [26, 517] RVT-GII Feature: gene Location: 26-517 bp Ori: CCE19343.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 74-482 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 74-482 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: CAFN01000235.1 Arthrospira sp. PCC 8005, WGS project CAFN00000000 data, strain PCC 8005, Contig4539-2130, whole genome shotgun sequence (79929 bp)
Overview 1 RT 1: 60-6452 bp Neighborhood of RT #1 [60, 6469] DDE_3 RVT-GII RVT_N RVT_N RVT-GII RVT-GII GIIM McrA BaeS rpsU Feature: gene Location: 60-401 bp Ori: CCE18073.1 Feature: domain Description: DDE_3 Location: 63-363 bp Feature: domain Description: DDE_3 Location: 63-363 bp Feature: gene Location: 439-741 bp Ori: CCE18074.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 520-715 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 520-715 bp Feature: gene Location: 623-1036 bp Ori: CCE18075.1 Feature: domain Description: RVT_N Location: 692-935 bp Feature: domain Description: RVT_N Location: 692-935 bp Feature: gene Location: 2688-2831 bp Feature: gene Location: 3198-3800 bp Ori: CCE18077.1 Feature: domain Description: RVT_N Location: 3267-3510 bp Feature: domain Description: RVT_N Location: 3267-3510 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3555-3783 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3555-3783 bp Feature: gene Location: 3964-4977 bp Ori: CCE18078.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3997-4225 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3997-4225 bp Feature: domain Description: GIIM Note: maturase Location: 4324-4546 bp Feature: domain Description: GIIM Note: maturase Location: 4324-4546 bp Feature: domain Description: McrA Location: 4660-4951 bp Feature: domain Description: McrA Location: 4660-4951 bp Feature: gene Location: 5077-6183 bp Ori: CCE18079.1 Feature: domain Description: BaeS Location: 5203-6172 bp Feature: domain Description: BaeS Location: 5203-6172 bp Feature: gene Location: 6272-6469 bp Ori: CCE18080.1 Gene: rpsU Feature: domain Description: rpsU Location: 6275-6452 bp Feature: domain Description: rpsU Location: 6275-6452 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_3 (pfam13358), RVT-GII, RVT_N (pfam13655), GIIM (pfam08388), McrA (COG4058), BaeS (COG0642), rpsU (PRK00270)

Seq: CAFN01000647.1 Arthrospira sp. PCC 8005, WGS project CAFN00000000 data, strain PCC 8005, Contig02430-2130, whole genome shotgun sequence (1492 bp)
Overview 1 RT 1: 134-1133 bp Neighborhood of RT #1 [134, 1276] RVT_N RVT-GII Feature: gene Location: 134-1276 bp Ori: CCE19657.1 Feature: domain Description: RVT_N Location: 173-416 bp Feature: domain Description: RVT_N Location: 173-416 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 461-1133 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 461-1133 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII

Seq: CAFN01000368.1 Arthrospira sp. PCC 8005, WGS project CAFN00000000 data, strain PCC 8005, Contig4644-2130, whole genome shotgun sequence (73687 bp)
Overview 1 RT 1: 806-5334 bp Neighborhood of RT #1 [806, 5334] INT_C_like_1 INT_C_like_1 RVT-GII RVT-GII GIIM HNHc Feature: gene Location: 806-2209 bp Ori: CCE18680.1 Gene: intA6 Feature: domain Description: INT_C_like_1 Location: 1574-1712 bp Feature: domain Description: INT_C_like_1 Location: 1574-1712 bp Feature: domain Description: INT_C_like_1 Location: 1928-2045 bp Feature: domain Description: INT_C_like_1 Location: 1928-2045 bp Feature: gene Location: 2206-2322 bp Feature: gene Location: 2364-2531 bp Ori: CCE18682.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2367-2529 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2367-2529 bp Feature: gene Location: 2535-2906 bp Ori: CCE18683.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2538-2832 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2538-2832 bp Feature: gene Location: 2953-3576 bp Ori: CCE18684.1 Feature: domain Description: GIIM Note: maturase Location: 2959-3172 bp Feature: domain Description: GIIM Note: maturase Location: 2959-3172 bp Feature: domain Description: HNHc Note: nucleases Location: 3385-3526 bp Feature: domain Description: HNHc Note: nucleases Location: 3385-3526 bp Feature: gene Location: 4114-5334 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT INT_C_like_1 (cd01184), RVT-GII, GIIM (pfam08388), HNHc (smart00507)

Seq: CAFN01000566.1 Arthrospira sp. PCC 8005, WGS project CAFN00000000 data, strain PCC 8005, Contig01606-2130, whole genome shotgun sequence (2414 bp)
Overview 1 RT 1: 430-2188 bp Neighborhood of RT #1 [430, 2214] RVT_N RVT-GII GIIM McrA Feature: gene Location: 430-2214 bp Ori: CCE19297.1 Feature: domain Description: RVT_N Location: 469-712 bp Feature: domain Description: RVT_N Location: 469-712 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 757-1426 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 757-1426 bp Feature: domain Description: GIIM Note: maturase Location: 1561-1771 bp Feature: domain Description: GIIM Note: maturase Location: 1561-1771 bp Feature: domain Description: McrA Location: 1924-2188 bp Feature: domain Description: McrA Location: 1924-2188 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), McrA (COG4058)

Seq: CAFN01000157.1 Arthrospira sp. PCC 8005, WGS project CAFN00000000 data, strain PCC 8005, Contig4524-2130, whole genome shotgun sequence (81364 bp)
Overview 1 RT 1: 36438-40914 bp Neighborhood of RT #1 [36438, 40914] RVT_N RVT-GII GIIM McrA Feature: gene Location: 36438-36905 bp Feature: gene Location: 36947-37039 bp Feature: gene Location: 37140-38921 bp Ori: CCE17824.1 Feature: domain Description: RVT_N Location: 37206-37449 bp Feature: domain Description: RVT_N Location: 37206-37449 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 37494-38163 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 37494-38163 bp Feature: domain Description: GIIM Note: maturase Location: 38268-38475 bp Feature: domain Description: GIIM Note: maturase Location: 38268-38475 bp Feature: domain Description: McrA Location: 38631-38895 bp Feature: domain Description: McrA Location: 38631-38895 bp Feature: gene Location: 39633-39869 bp Feature: gene Location: 40090-40914 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), McrA (COG4058)

Seq: CAFN01000088.1 Arthrospira sp. PCC 8005, WGS project CAFN00000000 data, strain PCC 8005, Contig00042-2130, whole genome shotgun sequence (1297 bp)
Overview 1 RT 1: 50-1192 bp Neighborhood of RT #1 [50, 1248] RVT_N RVT-GII RVT_N InsQ Feature: gene Location: 50-373 bp Ori: CCE17542.1 Feature: domain Description: RVT_N Location: 89-170 bp Feature: domain Description: RVT_N Location: 89-170 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 215-353 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 215-353 bp Feature: gene Location: 395-619 bp Ori: CCE17543.1 Feature: domain Description: RVT_N Location: 464-614 bp Feature: domain Description: RVT_N Location: 464-614 bp Feature: gene Location: 673-1248 bp Ori: CCE17544.1 Feature: domain Description: InsQ Location: 676-1192 bp Feature: domain Description: InsQ Location: 676-1192 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, InsQ (COG0675)

Seq: CAFN01000079.1 Arthrospira sp. PCC 8005, WGS project CAFN00000000 data, strain PCC 8005, Contig4416-2130, whole genome shotgun sequence (7918 bp)
Overview 1 RT 1: 3926-7262 bp Neighborhood of RT #1 [3926, 7288] PRK02693 PRK13474 RVT_N RVT-GII RVT-GII Feature: gene Location: 3926-4915 bp Ori: CCE17522.1 Gene: petA Feature: domain Description: PRK02693 Location: 3983-4913 bp Feature: domain Description: PRK02693 Location: 3983-4913 bp Feature: gene Location: 5005-5544 bp Ori: CCE17523.1 Gene: petC Feature: domain Description: PRK13474 Location: 5014-5542 bp Feature: domain Description: PRK13474 Location: 5014-5542 bp Feature: gene Location: 6541-6951 bp Ori: CCE17524.1 Feature: domain Description: RVT_N Location: 6580-6661 bp Feature: domain Description: RVT_N Location: 6580-6661 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6706-6934 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6706-6934 bp Feature: gene Location: 6941-7288 bp Ori: CCE17525.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6944-7262 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6944-7262 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK02693 (apocytochrome f; Reviewed), PRK13474 (cytochrome b6-f complex iron-sulfur subunit; Provisional), RVT_N (pfam13655), RVT-GII

Seq: CAFN01000008.1 Arthrospira sp. PCC 8005, WGS project CAFN00000000 data, strain PCC 8005, Contig4840-2130, whole genome shotgun sequence (59873 bp)
Overview 1 RT 1: 27417-35570 bp Neighborhood of RT #1 [27417, 35593] KOG4178 RVT-GII DUF1815 DUF2839 RVT_N RVT-GII GIIM NagA COG3744 Feature: gene Location: 27417-28319 bp Ori: CCE15222.1 Feature: domain Description: KOG4178 Location: 27465-28314 bp Feature: domain Description: KOG4178 Location: 27465-28314 bp Feature: gene Location: 28551-28763 bp Feature: gene Location: 29283-29675 bp Ori: CCE15224.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 29508-29670 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 29508-29670 bp Feature: gene Location: 29888-30016 bp Feature: gene Location: 30202-30360 bp Feature: gene Location: 30684-31028 bp Ori: CCE15227.1 Feature: domain Description: DUF1815 Location: 30690-30981 bp Feature: domain Description: DUF1815 Location: 30690-30981 bp Feature: gene Location: 31445-31624 bp Ori: CCE15228.1 Feature: domain Description: DUF2839 Location: 31472-31613 bp Feature: domain Description: DUF2839 Location: 31472-31613 bp Feature: gene Location: 31714-33219 bp Ori: CCE15229.1 Feature: domain Description: RVT_N Location: 31759-32005 bp Feature: domain Description: RVT_N Location: 31759-32 005 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 32089-32713 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 32 089-32 713 bp Feature: domain Description: GIIM Note: maturase Location: 32824-33046 bp Feature: domain Description: GIIM Note: maturase Location: 32 824-33046 bp Feature: gene Location: 33934-35136 bp Ori: CCE15230.1 Feature: domain Description: NagA Location: 34015-35014 bp Feature: domain Description: NagA Location: 34015-35014 bp Feature: gene Location: 35192-35593 bp Ori: CCE15231.1 Feature: domain Description: COG3744 Location: 35201-35570 bp Feature: domain Description: COG3744 Location: 35201-35570 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT KOG4178 (KOG4178, Soluble epoxide hydrolase ), RVT-GII, DUF1815 (pfam08844), DUF2839 (pfam10999), RVT_N (pfam13655), GIIM (pfam08388), NagA (COG1820), COG3744 (PIN domain nuclease, a component of toxin-antitoxin system (PIN domain) )

Seq: CAFN01000055.1 Arthrospira sp. PCC 8005, WGS project CAFN00000000 data, strain PCC 8005, Contig4938-2130, whole genome shotgun sequence (7081 bp)
Overview 1 RT 1: 296-3260 bp Neighborhood of RT #1 [296, 3280] RVT-GII RVT-GII RVT_N DUF45 Feature: gene Location: 296-457 bp Ori: CCE16677.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 329-455 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 329-455 bp Feature: gene Location: 621-851 bp Ori: CCE16678.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 627-834 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 627-834 bp Feature: gene Location: 1116-1340 bp Ori: CCE16679.1 Feature: domain Description: RVT_N Location: 1185-1335 bp Feature: domain Description: RVT_N Location: 1185-133 5 bp Feature: gene Location: 2606-3280 bp Ori: CCE16680.1 Feature: domain Description: DUF45 Location: 2645-3260 bp Feature: domain Description: DUF45 Location: 2645-3260 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, RVT_N (pfam13655), DUF45 (pfam01863)