myRT

myRT report for GCA_000177315.1_ASM17731v1

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Seq: ADFO01000057.1 Prevotella bivia JCVIHMP010 contig00067, whole genome shotgun sequence (26061 bp)
Overview 1 RT 1: 9004-16280 bp Neighborhood of RT #1 [9004, 16285] HTH_17 HTH_17 RVT-GII Intron_maturas2 Arm-DNA-bind_5 Phage_int_SAM_5 INTN1_C_like 2am3keto_CoA Feature: gene Location: 9004-9354 bp Feature: domain Description: HTH_17 Location: 9145-9283 bp Feature: domain Description: HTH_1 7 Location: 91 45-9283 bp Feature: gene Location: 9358-9720 bp Feature: domain Description: HTH_17 Location: 9484-9631 bp Feature: domain Description: HTH_1 7 Location: 9484-9631 bp Feature: gene Location: 11212-13020 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11476-12298 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 476-1 2298 bp Feature: domain Description: Intron_maturas2 Location: 12424-12679 bp Feature: domain Description: Intron_maturas2 Location: 1 2424-1 2679 bp Feature: gene Location: 13571-14740 bp Feature: domain Description: Arm-DNA-bind_5 Location: 13601-13856 bp Feature: domain Description: Arm-DNA-bind_5 Location: 1 3601 -1 3856 bp Feature: domain Description: Phage_int_SAM_5 Location: 13895-14216 bp Feature: domain Description: Phage_int_SAM_5 Location: 1 3895-1 421 6 bp Feature: domain Description: INTN1_C_like Location: 14255-14723 bp Feature: domain Description: INTN1 _C_like Location: 1 4255-1 4723 bp Feature: gene Location: 15098-16285 bp Feature: domain Description: 2am3keto_CoA Location: 15113-16280 bp Feature: domain Description: 2am3keto_CoA Location: 1 51 1 3-1 6280 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), Arm-DNA-bind_5 (pfam17293), Phage_int_SAM_5 (pfam13102), INTN1_C_like (cd01185), 2am3keto_CoA (TIGR01822), HTH_17 (pfam12728)

Seq: ADFO01000047.1 Prevotella bivia JCVIHMP010 contig00064, whole genome shotgun sequence (2485 bp)
Overview 1 RT 1: 127-1408 bp Neighborhood of RT #1 [127, 1803] RVT_N RVT-GII GIIM Feature: gene Location: 127-1803 bp Feature: RT Description: RVT_N Location: 187-430 bp Feature: RT Description: RVT_N Location: 187-430 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 475-1123 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 475-112 3 bp Feature: domain Description: GIIM Note: maturase Location: 1177-1408 bp Feature: domain Description: GIIM Note: maturase Location: 1177-1408 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)

Seq: ADFO01000099.1 Prevotella bivia JCVIHMP010 contig00060, whole genome shotgun sequence (986 bp)
Overview 1 RT 1: 1-544 bp Neighborhood of RT #1 [1, 543] RVT-GII Feature: gene Location: 1-543 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 391-544 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 91-544 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII