myRT

myRT report for GCA_000178195.1_ASM17819v1

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Seq: ADKO01000023.1 Bacteroides vulgatus PC510 contig00068, whole genome shotgun sequence (66143 bp)
Overview 1 RT 1: 2911-7985 bp Neighborhood of RT #1 [2911, 8002] Bac_Flav_CT_G RVT_N RVT-GII GIIM Bac_Flav_CT_G Feature: gene Location: 2911-3342 bp Feature: domain Description: Bac_Flav_CT_G Location: 3100-3325 bp Feature: domain Description: Bac_Flav_CT_G Location: 31 00-3325 bp Feature: gene Location: 3801-3935 bp Feature: gene Location: 3949-5625 bp Feature: RT Description: RVT_N Location: 4003-4246 bp Feature: RT Description: RVT_N Location: 4003-4246 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4291-4939 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4291 -4939 bp Feature: domain Description: GIIM Note: maturase Location: 4990-5224 bp Feature: domain Description: GIIM Note: maturase Location: 4990-5224 bp Feature: gene Location: 5606-5644 bp Feature: gene Location: 5723-8002 bp Feature: domain Description: Bac_Flav_CT_G Location: 5726-7985 bp Feature: domain Description: Bac_Flav_CT_G Location: 5726-7985 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Bac_Flav_CT_G (TIGR03783), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)

Seq: ADKO01000109.1 Bacteroides vulgatus PC510 contig00007, whole genome shotgun sequence (219806 bp)
Overview 1 RT 1: 188062-197811 bp Neighborhood of RT #1 [188062, 197811] Laminin_G_3 Laminin_G_3 RVT-DGRs Feature: gene Location: 188062-188367 bp Feature: gene Location: 188381-195100 bp Feature: domain Description: Laminin_G_3 Location: 189824-189902 bp Feature: domain Description: Laminin_G_3 Location: 18982 4-189902 bp Feature: domain Description: Laminin_G_3 Location: 190553-190979 bp Feature: domain Description: Laminin_G_3 Location: 190553-190979 bp Feature: gene Location: 195604-196908 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 195817-196492 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 195817-196492 bp Feature: gene Location: 196905-197390 bp Feature: gene Location: 197569-197811 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Laminin_G_3 (pfam13385), RVT-DGRs