myRT

myRT report for GCA_000178855.1_ASM17885v1

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Seq: ADVG01000005.1 Ktedonobacter racemifer DSM 44963 strain SOSP1-21 Krac_Contig202, whole genome shotgun sequence (1302518 bp)

Associated domains:myRT PolY_Pol_V_umuC (cd01700), DUF4113 (pfam13438), InsQ (COG0675), RVT-GII, GIIM (pfam08388), HNHc (smart00507), group_II_RT_mat (TIGR04416), RRXRR (pfam14239), McrA (COG4058), Abhydrolase_6 (pfam12697)
RVT_N (pfam13655), HNH (pfam01844), VCBS (pfam13517)

Seq: ADVG01000001.1 Ktedonobacter racemifer DSM 44963 strain SOSP1-21 Krac_Contig206, whole genome shotgun sequence (3837106 bp)

Associated domains:myRT SAF_AH_GD (cd11613), GD_AH_C (pfam04295), RRXRR (pfam14239), HNHc (smart00507), RVT_N (pfam13655), RVT-GII, YkfC (COG3344), InsQ (COG0675), F420_Rv1855c (TIGR03560), Bac_luciferase (pfam00296)
HTH_32 (pfam13565), GIIM (pfam08388), HNH (pfam01844), cysta_beta (TIGR01137), PRK05282 (dipeptidase PepE), HxlR (pfam01638), RVT-UG7, pyrF (TIGR01740), pyrE_Therm (TIGR01367), KOG0370 (KOG0370, Multifunctional pyrimidine synthesis protein CAD (includes carbamoyl-phophate synthetase, aspartate transcarbamylase, and glutamine amidotransferase) )
tspaseT_teng_N (TIGR01765), DDE_Tnp_1_assoc (pfam13808), DDE_Tnp_1 (pfam01609), PAS (smart00091), BaeS (COG0642), DinB_2 (pfam12867), PBP2_OppA (cd08504), GDE_N (pfam12439), GDE_C (pfam06202), Y1_Tnp (pfam01797)
SnoaL_2 (pfam12680), MhpC (COG0596)

Seq: ADVG01000004.1 Ktedonobacter racemifer DSM 44963 strain SOSP1-21 Krac_Contig203, whole genome shotgun sequence (2713222 bp)

Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), InsB (COG1662), STKc_PknB_like (cd14014), KOG0266 (KOG0266, WD40 repeat-containing protein ), WD40 (smart00320), RVT_N (pfam13655), GIIM (pfam08388), HNH (pfam01844)
InsQ (COG0675), YkfC (COG3344), DDE_5 (pfam13546), COG5659 (SRSO17 transposase ), DadA (COG0665), YafY (COG2378), PD40 (pfam07676), zinc_ribbon_2 (pfam13240), PAF-AH_p_II (pfam03403), Beta-lactamase2 (pfam13354)
Acetyltransf_1 (pfam00583), DDE_Tnp_1_assoc (pfam13808), DDE_Tnp_1 (pfam01609), leuC (TIGR00170), LysR (COG0583), CtpA (COG0793), DUF4158 (pfam13700), DDE_Tnp_Tn3 (pfam01526), InsE (COG2963), GloA (COG0346)
HTH_ARSR (smart00418), Tas (COG0667), PreA (COG1146), McrA (COG4058), AcrR (COG1309), YCII (pfam03795), COG3415 (Transposase )

Seq: ADVG01000002.1 Ktedonobacter racemifer DSM 44963 strain SOSP1-21 Krac_Contig205, whole genome shotgun sequence (2916502 bp)

Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507), HNH (pfam01844), MhpC (COG0596), COG3976 (Uncharacterized protein, contains FMN-binding domain ), NQR2_RnfD_RnfE (pfam03116), Fpr (COG1018), YkfC (COG3344)
GH36 (cd14791), XynC (COG5520), Fascin (pfam06268), Y1_Tnp (pfam01797), RRXRR (pfam14239), phoR_proteo (TIGR02966), STKc_PknB_like (cd14014), TPR (smart00028), COG2452 (Predicted site-specific integrase-resolvase ), Lactonase (pfam10282)
Competence (pfam03772), ComA-like_MBL-fold (cd07731), zinc_ribbon_2 (pfam13240), PRK05273 (D-tyrosyl-tRNA(Tyr) deacylase; Provisional), ACAD10_11_N-like (cd05154), DDE_Tnp_1_assoc (pfam13808), DDE_Tnp_1 (pfam01609), PRK05439 (pantothenate kinase; Provisional), PBP2_ModA_like_1 (cd13538), CysU (COG0555)
SRPBCC_8 (cd07817), ALDH_AldH-CAJ73105 (cd07131)

Seq: ADVG01000003.1 Ktedonobacter racemifer DSM 44963 strain SOSP1-21 Krac_Contig204, whole genome shotgun sequence (2766182 bp)

Associated domains:myRT Pcp (COG2039), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNH (pfam01844), Rv2061_F420 (TIGR03666), tspaseT_teng_N (TIGR01765), InsQ (COG0675), group_II_RT_mat (TIGR04416), HNHc (smart00507)
LolD (COG1136), LolE (COG4591), SalY (COG0577), Intron_maturas2 (pfam01348), KOG2565 (KOG2565, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) ), YwnB (COG2910), PRK11014 (HTH-type transcriptional repressor NsrR), DDE_Tnp_1_3 (pfam13612), F420_Rv1855c (TIGR03560), Bac_luciferase (pfam00296)
Tas (COG0667), PRK08273 (thiamine pyrophosphate protein; Provisional), RAYT (COG1943), HTH_31 (pfam13560), MLTR_LBD (pfam17765), GtrA (pfam04138), DUF772 (pfam05598), DDE_Tnp_1 (pfam01609), McrA (COG4058), ABC2_membrane_4 (pfam12730)