myRT

myRT report for GCA_000179075.1_ASM17907v1

Download annotations/find similar RTs

Seq: ADWQ01000094.1 Escherichia coli MS 85-1 E_coliMS85-1-1.0.1_Cont93.1, whole genome shotgun sequence (4331 bp)
Overview 1 RT 1: 1331-4199 bp Neighborhood of RT #1 [1331, 4199] PHA02517 RVT-GII GIIM Feature: gene Location: 1331-1573 bp Feature: gene Location: 1628-1798 bp Feature: domain Description: PHA02517 Location: 1631-1763 bp Feature: domain Description: PHA0251 7 Location: 1 631 -1 763 bp Feature: gene Location: 1951-3459 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2209-2941 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2209-2941 bp Feature: domain Description: GIIM Note: maturase Location: 3016-3214 bp Feature: domain Description: GIIM Note: maturase Location: 301 6-321 4 bp Feature: gene Location: 3428-3853 bp Feature: gene Location: 3744-4199 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388)

Seq: ADWQ01000022.1 Escherichia coli MS 85-1 E_coliMS85-1-1.0.1_Cont21.1, whole genome shotgun sequence (76146 bp)
Overview 1 RT 1: 51316-55198 bp Neighborhood of RT #1 [51316, 55203] dut slmA RVT-Retrons pyrE rph Feature: gene Location: 51316-51774 bp Feature: domain Description: dut Location: 51322-51769 bp Feature: domain Description: dut Location: 5132 2 -51769 bp Feature: gene Location: 51881-52477 bp Feature: domain Description: slmA Location: 51887-52463 bp Feature: domain Description: slmA Location: 51887-52 463 bp Feature: gene Location: 52523-53482 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 52658-53207 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 52 658-532 07 bp Feature: gene Location: 53780-54436 bp Feature: domain Description: pyrE Location: 53798-54431 bp Feature: domain Description: pyrE Location: 53798-54431 bp Feature: gene Location: 54487-55203 bp Feature: domain Description: rph Location: 54490-55198 bp Feature: domain Description: rph Location: 54490-55198 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT dut (TIGR00576), slmA (PRK09480), RVT-Retrons, pyrE (TIGR00336), rph (PRK00173)