myRT

myRT report for GCA_000179135.1_ASM17913v1

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Seq: ADWT01000017.1 Escherichia coli MS 124-1 E_coliMS124-1-1.0.1_Cont16.1, whole genome shotgun sequence (79188 bp)
Overview 1 RT 1: 41454-45337 bp Neighborhood of RT #1 [41454, 45342] dut slmA RVT-Retrons pyrE rph Feature: gene Location: 41454-41912 bp Feature: domain Description: dut Location: 41460-41907 bp Feature: domain Description: dut Location: 41 460-41 907 bp Feature: gene Location: 42019-42615 bp Feature: domain Description: slmA Location: 42025-42601 bp Feature: domain Description: slmA Location: 42025-42601 bp Feature: gene Location: 42661-43620 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 42796-43345 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 42796-43345 bp Feature: gene Location: 43918-44574 bp Feature: domain Description: pyrE Location: 43936-44569 bp Feature: domain Description: pyrE Location: 43936-44569 bp Feature: gene Location: 44626-45342 bp Feature: domain Description: rph Location: 44629-45337 bp Feature: domain Description: rph Location: 44629-45337 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT dut (TIGR00576), slmA (PRK09480), RVT-Retrons, pyrE (TIGR00336), rph (PRK00173)

Seq: ADWT01000084.1 Escherichia coli MS 124-1 E_coliMS124-1-1.0.1_Cont83.1, whole genome shotgun sequence (14592 bp)
Overview 1 RT 1: 11626-14494 bp Neighborhood of RT #1 [11626, 14494] PHA02517 RVT-GII GIIM Feature: gene Location: 11626-11868 bp Feature: gene Location: 11923-12093 bp Feature: domain Description: PHA02517 Location: 11926-12058 bp Feature: domain Description: PHA02 517 Location: 1192 6-12 058 bp Feature: gene Location: 12246-13754 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12504-13236 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12 504-132 36 bp Feature: domain Description: GIIM Note: maturase Location: 13311-13509 bp Feature: domain Description: GIIM Note: maturase Location: 13311-13509 bp Feature: gene Location: 13723-14148 bp Feature: gene Location: 14039-14494 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388)