myRT

myRT report for GCA_000183605.2_ASM18360v1

Download annotations/find similar RTs

Seq: AENO01000045.1 Porphyromonas asaccharolytica PR426713P-I contig00067, whole genome shotgun sequence (84939 bp)
Overview 1 RT 1: 25094-35467 bp Neighborhood of RT #1 [25094, 35730] Arm-DNA-bind_5 Phage_int_SAM_5 INTN1_C_like COG4646 COG4646 RVT-GII Intron_maturas2 PRK07726 DUF4099 DUF3945 DUF3945 Feature: gene Location: 25094-26224 bp Feature: domain Description: Arm-DNA-bind_5 Location: 25124-25379 bp Feature: domain Description: Arm-DNA-bind_5 Location: 251 24-25379 bp Feature: domain Description: Phage_int_SAM_5 Location: 25418-25739 bp Feature: domain Description: Phage_int_SAM_5 Location: 2541 8-25739 bp Feature: domain Description: INTN1_C_like Location: 25778-26198 bp Feature: domain Description: INTN1 _C_like Location: 25778-261 98 bp Feature: gene Location: 26214-27911 bp Feature: domain Description: COG4646 Location: 26751-26877 bp Feature: domain Description: COG4646 Location: 26751 -26877 bp Feature: domain Description: COG4646 Location: 27009-27900 bp Feature: domain Description: COG4646 Location: 27009-27900 bp Feature: gene Location: 28441-30213 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 28705-29527 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 28705-29527 bp Feature: domain Description: Intron_maturas2 Location: 29659-29905 bp Feature: domain Description: Intron_maturas2 Location: 29659-29905 bp Feature: gene Location: 32011-34098 bp Feature: domain Description: PRK07726 Location: 32014-33886 bp Feature: domain Description: PRK07726 Location: 3201 4-33886 bp Feature: gene Location: 34159-35730 bp Feature: domain Description: DUF4099 Location: 34642-34885 bp Feature: domain Description: DUF4099 Location: 34642-34885 bp Feature: domain Description: DUF3945 Location: 34984-35155 bp Feature: domain Description: DUF3945 Location: 34984-351 55 bp Feature: domain Description: DUF3945 Location: 35371-35467 bp Feature: domain Description: DUF3945 Location: 35371 -35467 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Arm-DNA-bind_5 (pfam17293), Phage_int_SAM_5 (pfam13102), INTN1_C_like (cd01185), COG4646 (Adenine-specific DNA methylase, N12 class ), RVT-GII, Intron_maturas2 (pfam01348), PRK07726 (DNA topoisomerase 3), DUF4099 (pfam13351), DUF3945 (pfam13101)