myRT

myRT report for GCA_000184285.2_ASM18428v1

Download annotations/find similar RTs

Seq: AEOS01000418.1 Lactobacillus coryniformis subsp. torquens DSM 20004 = KCTC 3535 contig00489, whole genome shotgun sequence (4774 bp)
Overview 1 RT 1: 1388-4582 bp Neighborhood of RT #1 [1388, 4584] DUF536 SLATT_5 RVT-AbiA DUF2992 Feature: gene Location: 1388-1876 bp Feature: domain Description: DUF536 Location: 1673-1778 bp Feature: domain Description: DUF536 Location: 1 673-1 778 bp Feature: gene Location: 1873-2439 bp Feature: domain Description: SLATT_5 Location: 1888-2422 bp Feature: domain Description: SLATT_5 Location: 1 888-2422 bp Feature: gene Location: 2417-3649 bp Feature: RT Description: RVT-AbiA Note: AbiA RT Location: 2852-3314 bp Feature: RT Description: RVT-AbiA Note: AbiA RT Location: 2852-331 4 bp Feature: gene Location: 3658-3930 bp Feature: gene Location: 4162-4584 bp Feature: domain Description: DUF2992 Location: 4186-4582 bp Feature: domain Description: DUF2992 Location: 41 86-4582 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF536 (pfam04394), SLATT_5 (pfam18160), RVT-AbiA, DUF2992 (pfam11208)

Seq: AEOS01000091.1 Lactobacillus coryniformis subsp. torquens DSM 20004 = KCTC 3535 contig00100, whole genome shotgun sequence (7514 bp)
Overview 1 RT 1: 4672-7332 bp Neighborhood of RT #1 [4672, 7511] PRK06481 PRK06481 RVT-GII GIIM Feature: gene Location: 4672-5343 bp Feature: domain Description: PRK06481 Location: 4675-5341 bp Feature: domain Description: PRK06481 Location: 4675-5341 bp Feature: gene Location: 5418-6161 bp Feature: domain Description: PRK06481 Location: 5502-6120 bp Feature: domain Description: PRK06481 Location: 5502 -612 0 bp Feature: gene Location: 6387-7511 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6447-7065 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6447-7065 bp Feature: domain Description: GIIM Note: maturase Location: 7119-7332 bp Feature: domain Description: GIIM Note: maturase Location: 7119-7332 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK06481 (flavocytochrome c), RVT-GII, GIIM (pfam08388)