myRT

myRT report for GCA_000185385.1_ASM18538v1

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Seq: GL622296.1 Eubacterium saburreum DSM 3986 genomic scaffold SCAFFOLD1, whole genome shotgun sequence (3037543 bp)
Overview 1 RT 1: 1680720-1685728 bp 2 RT 2: 2720984-2734841 bp Neighborhood of RT #1 [1680720, 1685728] RelB_DinJ RVT-CRISPR cas1_HMARI Cas2_I_II_III Neighborhood of RT #2 [2720984, 2734861] SSB_OBF COG4646 HELICc RVT-GII COG4983 COG4646 COG4646 Feature: gene Location: 1680720-1681025 bp Ori: EFU76452.1 Feature: domain Description: RelB_DinJ Location: 1680738-1680927 bp Feature: domain Description: RelB_DinJ Location: 1 680738-1 680927 bp Feature: gene Location: 1681900-1682019 bp Feature: gene Location: 1682449-1684368 bp Ori: EFU76454.1 Gene: cas1 Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 1682665-1683253 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 1 682665-1 683253 bp Feature: domain Description: cas1_HMARI Location: 1683382-1684360 bp Feature: domain Description: cas1 _HMARI Location: 1 683382-1 684360 bp Feature: gene Location: 1684377-1684637 bp Ori: EFU76455.1 Feature: domain Description: Cas2_I_II_III Location: 1684386-1684614 bp Feature: domain Description: Cas2_I_II_III Location: 1 684386-1 68461 4 bp Feature: gene Location: 1685597-1685728 bp Feature: gene Location: 2720984-2721967 bp Ori: EFU75505.1 Feature: domain Description: SSB_OBF Location: 2721569-2721821 bp Feature: domain Description: SSB_OBF Location: 2721 569-2721 821 bp Feature: gene Location: 2722069-2724570 bp Ori: EFU75506.1 Feature: domain Description: COG4646 Location: 2722072-2722630 bp Feature: domain Description: COG4646 Location: 2722072-2722630 bp Feature: domain Description: HELICc Location: 2722666-2723044 bp Feature: domain Description: HELICc Location: 2722666-2723044 bp Feature: gene Location: 2724748-2726625 bp Ori: EFU75507.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2725042-2725756 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2725042-2725756 bp Feature: gene Location: 2726616-2726819 bp Feature: gene Location: 2727332-2734861 bp Ori: EFU75509.1 Feature: domain Description: COG4983 Location: 2727356-2728220 bp Feature: domain Description: COG4983 Location: 2727356-2728220 bp Feature: domain Description: COG4646 Location: 2732672-2733593 bp Feature: domain Description: COG4646 Location: 2732672-2733593 bp Feature: domain Description: COG4646 Location: 2733722-2734841 bp Feature: domain Description: COG4646 Location: 2733722-2734841 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RelB_DinJ (TIGR02384), RVT-CRISPR, cas1_HMARI (TIGR03641), Cas2_I_II_III (cl11442), SSB_OBF (cd04496), COG4646 (Adenine-specific DNA methylase, N12 class ), HELICc (smart00490), RVT-GII, COG4983 (Uncharacterized protein, contains Primase-polymerase (Primpol) domain )