myRT

myRT report for GCA_000185605.1_ASM18560v1

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Seq: GL622538.1 Bacteroides eggerthii 1_2_48FAA genomic scaffold supercont1.1, whole genome shotgun sequence (727100 bp)
Overview 1 RT 1: 422640-428402 bp Neighborhood of RT #1 [422640, 428443] DUF4133 Bac_Flav_CT_G RVT-GII Intron_maturas2 HNHc Bac_Flav_CT_G DUF3876 Feature: gene Location: 422640-422975 bp Ori: EFV31353.1 Feature: domain Description: DUF4133 Location: 422658-422928 bp Feature: domain Description: DUF41 33 Location: 422658-422928 bp Feature: gene Location: 422972-424915 bp Ori: EFV31354.1 Feature: domain Description: Bac_Flav_CT_G Location: 422975-424898 bp Feature: domain Description: Bac_Flav_CT_G Location: 422975-424898 bp Feature: gene Location: 425492-427303 bp Ori: EFV31355.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 425756-426578 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 425756-426578 bp Feature: domain Description: Intron_maturas2 Location: 426647-426983 bp Feature: domain Description: Intron_maturas2 Location: 426647-426983 bp Feature: domain Description: HNHc Note: nucleases Location: 427124-427274 bp Feature: domain Description: HNHc Note: nucleases Location: 4271 24-427274 bp Feature: gene Location: 427450-428001 bp Ori: EFV31356.1 Feature: domain Description: Bac_Flav_CT_G Location: 427453-427984 bp Feature: domain Description: Bac_Flav_CT_G Location: 427453-427984 bp Feature: gene Location: 428036-428443 bp Ori: EFV31357.1 Feature: domain Description: DUF3876 Location: 428141-428402 bp Feature: domain Description: DUF3876 Location: 4281 41 -428402 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF4133 (pfam13571), Bac_Flav_CT_G (TIGR03783), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), DUF3876 (pfam12992)

Seq: GL622543.1 Bacteroides eggerthii 1_2_48FAA genomic scaffold supercont1.6, whole genome shotgun sequence (302602 bp)
Overview 1 RT 1: 87898-93037 bp Neighborhood of RT #1 [87898, 93117] DUF1738 MPTase-PolyVal RVT-GII Intron_maturas2 DUF1738 SSB_OBF SSB_OBF Feature: gene Location: 87898-88266 bp Feature: gene Location: 88325-89941 bp Ori: EFV29447.1 Feature: domain Description: DUF1738 Location: 88451-88727 bp Feature: domain Description: DUF1738 Location: 88451-8872 7 bp Feature: domain Description: MPTase-PolyVal Location: 88889-89201 bp Feature: domain Description: MPTase-PolyVal Location: 88889-892 01 bp Feature: gene Location: 89934-91751 bp Ori: EFV29448.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 90210-91032 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 902 10-91032 bp Feature: domain Description: Intron_maturas2 Location: 91209-91431 bp Feature: domain Description: Intron_maturas2 Location: 912 09-91431 bp Feature: gene Location: 92285-92503 bp Ori: EFV29449.1 Feature: domain Description: DUF1738 Location: 92339-92489 bp Feature: domain Description: DUF1738 Location: 92 339-92 489 bp Feature: gene Location: 92509-93117 bp Ori: EFV29450.1 Feature: domain Description: SSB_OBF Location: 92527-92731 bp Feature: domain Description: SSB_OBF Location: 92 52 7-92 731 bp Feature: domain Description: SSB_OBF Location: 92833-93037 bp Feature: domain Description: SSB_OBF Location: 92 833-93037 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF1738 (pfam08401), MPTase-PolyVal (pfam18818), RVT-GII, Intron_maturas2 (pfam01348), SSB_OBF (cd04496)

Seq: GL622553.1 Bacteroides eggerthii 1_2_48FAA genomic scaffold supercont1.16, whole genome shotgun sequence (33545 bp)
Overview 1 RT 1: 1-3938 bp Neighborhood of RT #1 [1, 4405] RVT-UG8 RVT-UG3 Feature: gene Location: 1-371 bp Feature: gene Location: 1359-3191 bp Ori: EFV28067.1 Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 1875-2310 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 1875-23 10 bp Feature: gene Location: 3179-4405 bp Ori: EFV28068.1 Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 3467-3938 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 3 467-3 93 8 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG8, RVT-UG3

Seq: GL622540.1 Bacteroides eggerthii 1_2_48FAA genomic scaffold supercont1.3, whole genome shotgun sequence (596525 bp)
Overview 1 RT 1: 288752-294064 bp Neighborhood of RT #1 [288752, 294064] RVT-UG27 Feature: gene Location: 288752-289399 bp Feature: gene Location: 289413-290081 bp Feature: gene Location: 290074-291231 bp Ori: EFV30648.1 Feature: RT Description: RVT-UG27 Note: UG27 RT Location: 290266-290902 bp Feature: RT Description: RVT-UG27 Note: UG27 RT Location: 290266-290902 bp Feature: gene Location: 292500-292979 bp Feature: gene Location: 292976-294064 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG27