myRT

myRT report for GCA_000186105.1_Bacteroides_sp_3_1_40A_V1

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Seq: GL635660.1 Bacteroides sp. 3_1_40A genomic scaffold supercont1.8, whole genome shotgun sequence (335301 bp)
Overview 1 RT 1: 49147-53914 bp Neighborhood of RT #1 [49147, 53991] RVT-DGRs Phage_Mu_F CDI_toxin_Bp1026b_like Feature: gene Location: 49147-49332 bp Feature: gene Location: 49571-50056 bp Feature: gene Location: 50053-51354 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 50260-50941 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 50260-50941 bp Feature: gene Location: 51736-51969 bp Feature: gene Location: 52066-53991 bp Feature: domain Description: Phage_Mu_F Location: 52957-53242 bp Feature: domain Description: Phage_Mu_F Location: 52957-53242 bp Feature: domain Description: CDI_toxin_Bp1026b_like Location: 53641-53914 bp Feature: domain Description: CDI_toxin_Bp1 026b_like Location: 53641 -5391 4 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs, Phage_Mu_F (pfam04233), CDI_toxin_Bp1026b_like

Seq: GL635653.1 Bacteroides sp. 3_1_40A genomic scaffold supercont1.1, whole genome shotgun sequence (1234496 bp)
Overview 1 RT 1: 1065645-1070986 bp Neighborhood of RT #1 [1065645, 1075107] RVT-DGRs Laminin_G_3 Laminin_G_3 Feature: gene Location: 1065645-1065887 bp Feature: gene Location: 1066067-1066552 bp Feature: gene Location: 1066549-1067853 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1066759-1067437 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1066759-1067437 bp Feature: gene Location: 1067970-1068173 bp Feature: gene Location: 1068370-1075107 bp Feature: domain Description: Laminin_G_3 Location: 1069831-1069909 bp Feature: domain Description: Laminin_G_3 Location: 1069831-1069909 bp Feature: domain Description: Laminin_G_3 Location: 1070560-1070986 bp Feature: domain Description: Laminin_G_3 Location: 1070560-1070986 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs, Laminin_G_3 (pfam13385)

Seq: GL635657.1 Bacteroides sp. 3_1_40A genomic scaffold supercont1.5, whole genome shotgun sequence (367383 bp)
Overview 1 RT 1: 79070-88480 bp Neighborhood of RT #1 [79070, 88480] RVT-DGRs Feature: gene Location: 79070-85597 bp Feature: gene Location: 85737-85901 bp Feature: gene Location: 86103-87404 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 86313-86991 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 863 13 -86991 bp Feature: gene Location: 87406-87894 bp Feature: gene Location: 88172-88480 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs

Seq: GL635680.1 Bacteroides sp. 3_1_40A genomic scaffold supercont1.28, whole genome shotgun sequence (2493 bp)
Overview 1 RT 1: 569-2309 bp Neighborhood of RT #1 [569, 2380] RVT-GII Intron_maturas2 HNHc Feature: gene Location: 569-2380 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 833-1655 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 833-1655 bp Feature: domain Description: Intron_maturas2 Location: 1844-2054 bp Feature: domain Description: Intron_maturas2 Location: 184 4 -2054 bp Feature: domain Description: HNHc Note: nucleases Location: 2204-2309 bp Feature: domain Description: HNHc Note: nucleases Location: 2204 -2309 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)