myRT

myRT report for GCA_000188315.1_ASM18831v1

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Seq: CM001076.1 Streptococcus dysgalactiae subsp. dysgalactiae ATCC 27957 chromosome, whole genome shotgun sequence (2141837 bp)
Overview 1 RT 1: 685565-691994 bp 2 RT 2: 847458-855195 bp 3 RT 3: 1022217-1031831 bp 4 RT 4: 1574318-1584447 bp 5 RT 5: 1590667-1598359 bp Neighborhood of RT #1 [685565, 692026] ABC2_membrane_3 RVT_N RVT-GII GIIM ABC2_membrane_3 COG2374 Gram_pos_anchor Neighborhood of RT #2 [847458, 855233] PrgI VirB4_CagE RVT_N RVT-GII GIIM TraC-F-type Peptidase_M23 Phage_lysozyme2 PRK08581 Neighborhood of RT #3 [1022217, 1031831] RVT_N RVT-GII GIIM N6_Mtase COG4646 KOG0390 Neighborhood of RT #4 [1574318, 1584447] RVT_N RVT-GII GIIM N6_Mtase COG4646 KOG0390 Neighborhood of RT #5 [1590667, 1598442] Peptidase_M23 Phage_lysozyme2 PRK08581 TraC-F-type RVT_N RVT-GII GIIM TraC-F-type PrgI Feature: gene Location: 685565-685816 bp Feature: domain Description: ABC2_membrane_3 Location: 685604-685760 bp Feature: domain Description: ABC2_membrane_3 Location: 685604-685760 bp Feature: gene Location: 685755-685889 bp Feature: gene Location: 686376-688034 bp Feature: RT Description: RVT_N Location: 686421-686664 bp Feature: RT Description: RVT_N Location: 686421 -686664 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 686709-687357 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 686709-687357 bp Feature: domain Description: GIIM Note: maturase Location: 687414-687642 bp Feature: domain Description: GIIM Note: maturase Location: 68741 4-687642 bp Feature: gene Location: 688144-688845 bp Feature: domain Description: ABC2_membrane_3 Location: 688195-688816 bp Feature: domain Description: ABC2_membrane_3 Location: 6881 95-68881 6 bp Feature: gene Location: 689201-692026 bp Feature: domain Description: COG2374 Location: 689465-691814 bp Feature: domain Description: COG2374 Location: 689465-691 81 4 bp Feature: domain Description: Gram_pos_anchor Location: 691901-691994 bp Feature: domain Description: Gram_pos_anchor Location: 691 901 -691 994 bp Feature: gene Location: 847458-847811 bp Feature: domain Description: PrgI Location: 847470-847728 bp Feature: domain Description: PrgI Location: 847470-847728 bp Feature: gene Location: 847768-849252 bp Feature: domain Description: VirB4_CagE Location: 848407-848983 bp Feature: domain Description: VirB4_CagE Location: 848407-848983 bp Feature: gene Location: 849786-851459 bp Feature: RT Description: RVT_N Location: 849858-850098 bp Feature: RT Description: RVT_N Location: 849858-850098 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 850146-850806 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8501 46-850806 bp Feature: domain Description: GIIM Note: maturase Location: 850875-851094 bp Feature: domain Description: GIIM Note: maturase Location: 850875-851 094 bp Feature: gene Location: 851464-852432 bp Feature: domain Description: TraC-F-type Location: 851557-852253 bp Feature: domain Description: TraC-F-type Location: 851 557-852253 bp Feature: gene Location: 852429-855233 bp Feature: domain Description: Peptidase_M23 Location: 853875-854079 bp Feature: domain Description: Peptidase_M23 Location: 853875-854079 bp Feature: domain Description: Phage_lysozyme2 Location: 854232-854742 bp Feature: domain Description: Phage_lysozyme2 Location: 854232-854742 bp Feature: domain Description: PRK08581 Location: 854859-855195 bp Feature: domain Description: PRK08581 Location: 854859-8551 95 bp Feature: gene Location: 1022217-1022516 bp Feature: gene Location: 1022588-1023397 bp Feature: gene Location: 1023531-1025189 bp Feature: RT Description: RVT_N Location: 1023576-1023819 bp Feature: RT Description: RVT_N Location: 1 023576-1 02381 9 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1023864-1024512 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 023864-1 02451 2 bp Feature: domain Description: GIIM Note: maturase Location: 1024569-1024797 bp Feature: domain Description: GIIM Note: maturase Location: 1 024569-1 024797 bp Feature: gene Location: 1025749-1031229 bp Feature: domain Description: N6_Mtase Location: 1027243-1027834 bp Feature: domain Description: N6_Mtase Location: 1 027243-1 027834 bp Feature: domain Description: COG4646 Location: 1028425-1030732 bp Feature: domain Description: COG4646 Location: 1 028425-1 030732 bp Feature: domain Description: KOG0390 Location: 1031002-1031200 bp Feature: domain Description: KOG0390 Location: 1 031 002-1 031 200 bp Feature: gene Location: 1031280-1031831 bp Feature: gene Location: 1574318-1574617 bp Feature: gene Location: 1574688-1575497 bp Feature: gene Location: 1575631-1577289 bp Feature: RT Description: RVT_N Location: 1575676-1575919 bp Feature: RT Description: RVT_N Location: 1 575676-1 57591 9 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1575964-1576612 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 575964-1 57661 2 bp Feature: domain Description: GIIM Note: maturase Location: 1576669-1576897 bp Feature: domain Description: GIIM Note: maturase Location: 1 576669-1 576897 bp Feature: gene Location: 1577849-1583845 bp Feature: domain Description: N6_Mtase Location: 1579859-1580450 bp Feature: domain Description: N6_Mtase Location: 1 579859-1 580450 bp Feature: domain Description: COG4646 Location: 1581041-1583348 bp Feature: domain Description: COG4646 Location: 1 581 041 -1 583348 bp Feature: domain Description: KOG0390 Location: 1583618-1583816 bp Feature: domain Description: KOG0390 Location: 1 58361 8-1 58381 6 bp Feature: gene Location: 1583896-1584447 bp Feature: gene Location: 1590667-1593471 bp Feature: domain Description: Peptidase_M23 Location: 1592113-1592317 bp Feature: domain Description: Peptidase_M23 Location: 1 5921 1 3-1 59231 7 bp Feature: domain Description: Phage_lysozyme2 Location: 1592467-1592980 bp Feature: domain Description: Phage_lysozyme2 Location: 1 592467-1 592980 bp Feature: domain Description: PRK08581 Location: 1593097-1593433 bp Feature: domain Description: PRK08581 Location: 1 593097-1 593433 bp Feature: gene Location: 1593468-1594436 bp Feature: domain Description: TraC-F-type Location: 1593561-1594257 bp Feature: domain Description: TraC-F-type Location: 1 593561 -1 594257 bp Feature: gene Location: 1594441-1596114 bp Feature: RT Description: RVT_N Location: 1594513-1594753 bp Feature: RT Description: RVT_N Location: 1 59451 3-1 594753 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1594801-1595461 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 594801 -1 595461 bp Feature: domain Description: GIIM Note: maturase Location: 1595530-1595749 bp Feature: domain Description: GIIM Note: maturase Location: 1 595530-1 595749 bp Feature: gene Location: 1596648-1598132 bp Feature: domain Description: TraC-F-type Location: 1597440-1597821 bp Feature: domain Description: TraC-F-type Location: 1 597440-1 597821 bp Feature: gene Location: 1598089-1598442 bp Feature: domain Description: PrgI Location: 1598101-1598359 bp Feature: domain Description: PrgI Location: 1 5981 01 -1 598359 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ABC2_membrane_3 (pfam12698), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), COG2374 (Predicted extracellular nuclease ), Gram_pos_anchor (pfam00746), PrgI (pfam12666), VirB4_CagE (TIGR00929), TraC-F-type (TIGR02746), Peptidase_M23 (pfam01551)
Phage_lysozyme2 (pfam18013), PRK08581 (amidase domain-containing protein), N6_Mtase (pfam02384), COG4646 (Adenine-specific DNA methylase, N12 class ), KOG0390 (KOG0390, DNA repair protein, SNF2 family )