myRT

myRT report for GCA_000188875.2_ASM18887v2

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Seq: ADUS01000012.1 Escherichia coli RN587/1 RN587.assembly.20, whole genome shotgun sequence (163565 bp)
Overview 1 RT 1: 160921-163087 bp Neighborhood of RT #1 [160921, 163565] DinI RVT-Retrons Feature: gene Location: 160921-161154 bp Ori: EFZ76294.1 Feature: domain Description: DinI Location: 160963-161149 bp Feature: domain Description: DinI Location: 1 60963-1 61 1 49 bp Feature: gene Location: 161945-162106 bp Feature: gene Location: 162319-163565 bp Ori: EFZ76296.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 162463-163087 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 62463-1 63087 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DinI (pfam06183), RVT-Retrons

Seq: ADUS01000057.1 Escherichia coli RN587/1 RN587.assembly.61, whole genome shotgun sequence (48351 bp)
Overview 1 RT 1: 29009-33398 bp Neighborhood of RT #1 [29009, 33583] PHA02517 InsE RVT-Retrons RVT-Retrons COG3950 TIGR02646 Feature: gene Location: 29009-29602 bp Ori: EFZ72555.1 Feature: domain Description: PHA02517 Location: 29033-29549 bp Feature: domain Description: PHA02 517 Location: 2 9033-2 9549 bp Feature: gene Location: 29629-29931 bp Ori: EFZ72556.1 Feature: domain Description: InsE Location: 29638-29920 bp Feature: domain Description: InsE Location: 2 9638-2 992 0 bp Feature: gene Location: 30411-30650 bp Ori: EFZ72557.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 30447-30648 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 30447-30648 bp Feature: gene Location: 30688-31281 bp Ori: EFZ72558.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 30721-31048 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 3072 1-31048 bp Feature: gene Location: 31278-32930 bp Ori: EFZ72559.1 Feature: domain Description: COG3950 Location: 31476-32895 bp Feature: domain Description: COG3950 Location: 31476-32 895 bp Feature: gene Location: 32933-33583 bp Ori: EFZ72560.1 Feature: domain Description: TIGR02646 Location: 32999-33398 bp Feature: domain Description: TIGR02 646 Location: 32 999-33398 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), InsE (COG2963), RVT-Retrons, COG3950 (Predicted ATP-binding protein involved in virulence ), TIGR02646 (TIGR02646 family protein)