myRT

myRT report for GCA_000193935.2_ASM19393v2

Download annotations/find similar RTs

Seq: AERO01000109.1 Shigella flexneri CDC 796-83, whole genome shotgun sequence (34711 bp)
Overview 1 RT 1: 9764-15219 bp Neighborhood of RT #1 [9764, 15251] PHA02517 InsE RVT-GII LZ_Tnp_IS66 zf-IS66 DDE_Tnp_IS66 DDE_Tnp_IS66_C TnpB_IS66 Feature: gene Location: 9764-10585 bp Feature: domain Description: PHA02517 Location: 9770-10574 bp Feature: domain Description: PHA0251 7 Location: 9770-1 0574 bp Feature: gene Location: 10630-10932 bp Feature: domain Description: InsE Location: 10639-10921 bp Feature: domain Description: InsE Location: 1 0639-1 0921 bp Feature: gene Location: 12369-13274 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12543-13197 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 2543-1 31 97 bp Feature: gene Location: 13278-14870 bp Feature: domain Description: LZ_Tnp_IS66 Location: 13437-13647 bp Feature: domain Description: LZ_Tnp_IS66 Location: 1 3437-1 3647 bp Feature: domain Description: zf-IS66 Location: 13671-13803 bp Feature: domain Description: zf-IS66 Location: 1 3671 -1 3803 bp Feature: domain Description: DDE_Tnp_IS66 Location: 13848-14715 bp Feature: domain Description: DDE_Tnp_IS66 Location: 1 3848-1 471 5 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 14739-14847 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 1 4739-1 4847 bp Feature: gene Location: 14901-15251 bp Feature: domain Description: TnpB_IS66 Location: 14928-15219 bp Feature: domain Description: TnpB_IS66 Location: 1 4928-1 521 9 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsE (COG2963), RVT-GII, LZ_Tnp_IS66 (pfam13007), zf-IS66 (pfam13005), DDE_Tnp_IS66 (pfam03050), DDE_Tnp_IS66_C (pfam13817), TnpB_IS66 (pfam05717), PHA02517 (putative transposase OrfB; Reviewed)