myRT

myRT report for GCA_000204015.1_ASM20401v1

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Seq: GL883077.1 Asticcacaulis biprosthecum C19 genomic scaffold ABI_scaffold00002, whole genome shotgun sequence (2371497 bp)
Overview 1 RT 1: 1626528-1631483 bp 2 RT 2: 1852002-1858236 bp Neighborhood of RT #1 [1626528, 1631524] DUF1851 RVT-UG16 XynE_like SOUL Neighborhood of RT #2 [1852002, 1858247] Uup RVT-UG12 Aes Fdhalpha-like Feature: gene Location: 1626528-1627001 bp Ori: EGF93159.1 Feature: domain Description: DUF1851 Location: 1626723-1626945 bp Feature: domain Description: DUF1 851 Location: 1 626723-1 626945 bp Feature: gene Location: 1626991-1627329 bp Feature: gene Location: 1627597-1629093 bp Ori: EGF93161.1 Feature: RT Description: RVT-UG16 Note: UG16 RT Location: 1628011-1628380 bp Feature: RT Description: RVT-UG1 6 Note: UG1 6 RT Location: 1 62801 1 -1 628380 bp Feature: gene Location: 1629466-1630746 bp Ori: EGF93162.1 Feature: domain Description: XynE_like Location: 1630093-1630714 bp Feature: domain Description: XynE_like Location: 1 630093-1 63071 4 bp Feature: gene Location: 1630865-1631524 bp Ori: EGF93163.1 Feature: domain Description: SOUL Location: 1630946-1631483 bp Feature: domain Description: SOUL Location: 1 630946-1 631 483 bp Feature: gene Location: 1852002-1853630 bp Ori: EGF93336.1 Feature: domain Description: Uup Location: 1852005-1853598 bp Feature: domain Description: Uup Location: 1 852005-1 853598 bp Feature: gene Location: 1854282-1854395 bp Feature: gene Location: 1855334-1856962 bp Ori: EGF93338.1 Feature: RT Description: RVT-UG12 Note: UG12 RT Location: 1855685-1856135 bp Feature: RT Description: RVT-UG1 2 Note: UG1 2 RT Location: 1 855685-1 8561 35 bp Feature: gene Location: 1857148-1858098 bp Ori: EGF93339.1 Feature: domain Description: Aes Location: 1857340-1858033 bp Feature: domain Description: Aes Location: 1 857340-1 858033 bp Feature: gene Location: 1858104-1858247 bp Ori: EGF93340.1 Feature: domain Description: Fdhalpha-like Location: 1858116-1858236 bp Feature: domain Description: Fdhalpha-like Location: 1 8581 1 6-1 858236 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF1851 (pfam08906), RVT-UG16, XynE_like (cd01830), SOUL (pfam04832), Uup (COG0488), RVT-UG12, Aes (COG0657), Fdhalpha-like (TIGR01701)

Seq: GL883080.1 Asticcacaulis biprosthecum C19 genomic scaffold ABI_scaffold00005, whole genome shotgun sequence (817867 bp)
Overview 1 RT 1: 303309-309398 bp Neighborhood of RT #1 [303309, 309398] LysR RVT-Retrons Feature: gene Location: 303309-304217 bp Ori: EGF89674.1 Feature: domain Description: LysR Location: 303324-304191 bp Feature: domain Description: LysR Location: 30332 4-304191 bp Feature: gene Location: 304219-305316 bp Feature: gene Location: 306022-307137 bp Ori: EGF89676.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 306244-306787 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 3062 44-306787 bp Feature: gene Location: 307816-307974 bp Feature: gene Location: 308895-309398 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT LysR (COG0583), RVT-Retrons