myRT

myRT report for GCA_000205365.2_ASM20536v2

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Seq: AFEF01000007.1 Staphylococcus aureus subsp. aureus 21172 contig00030, whole genome shotgun sequence (29516 bp)
Overview 1 RT 1: 23539-29084 bp Neighborhood of RT #1 [23539, 29084] AlsD PRK08617 RVT-Retrons Feature: gene Location: 23539-24243 bp Ori: EGG63059.1 Gene: budA Feature: domain Description: AlsD Location: 23542-24241 bp Feature: domain Description: AlsD Location: 23542-24241 bp Feature: gene Location: 24280-25944 bp Ori: EGG63070.1 Gene: alsS Feature: domain Description: PRK08617 Location: 24289-25936 bp Feature: domain Description: PRK0861 7 Location: 24289-25936 bp Feature: gene Location: 27194-28210 bp Ori: EGG63065.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 27344-27881 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 27344-27881 bp Feature: gene Location: 28455-29084 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AlsD (COG3527), PRK08617 (acetolactate synthase AlsS), RVT-Retrons

Seq: AFEF01000030.1 Staphylococcus aureus subsp. aureus 21172 contig00048, whole genome shotgun sequence (27267 bp)
Overview 1 RT 1: 1722-8269 bp Neighborhood of RT #1 [1722, 8269] MecR1 Transpeptidase PenP RVT-AbiK RVT-AbiK Feature: gene Location: 1722-3479 bp Ori: EGG60447.1 Gene: blaR Feature: domain Description: MecR1 Location: 1725-2754 bp Feature: domain Description: MecR1 Location: 172 5-2 754 bp Feature: domain Description: Transpeptidase Location: 2808-3453 bp Feature: domain Description: Transpeptidase Location: 2 808-3453 bp Feature: gene Location: 3586-4431 bp Ori: EGG60436.1 Feature: domain Description: PenP Location: 3598-4423 bp Feature: domain Description: PenP Location: 3598-442 3 bp Feature: gene Location: 4785-5876 bp Ori: EGG60442.1 Feature: RT Description: RVT-AbiK Note: AbiK RT Location: 4788-4968 bp Feature: RT Description: RVT-AbiK Note: AbiK RT Location: 4788-4968 bp Feature: gene Location: 5963-6553 bp Ori: EGG60445.1 Feature: RT Description: RVT-AbiK Note: AbiK RT Location: 6437-6536 bp Feature: RT Description: RVT-AbiK Note: AbiK RT Location: 6437-6536 bp Feature: gene Location: 7093-7701 bp Feature: gene Location: 7781-8269 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT MecR1 (COG4219), Transpeptidase (pfam00905), PenP (COG2367), RVT-AbiK