myRT

myRT report for GCA_000209425.1_Lach_bact_6_1_63FAA_V1

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Seq: GL890565.1 Lachnospiraceae bacterium 6_1_63FAA genomic scaffold supercont1.18, whole genome shotgun sequence (1693 bp)
Overview 1 RT 1: 47-1271 bp Neighborhood of RT #1 [47, 1276] RVT-GII GIIM Feature: gene Location: 47-1276 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 398-1019 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 398-1 01 9 bp Feature: domain Description: GIIM Note: maturase Location: 1073-1271 bp Feature: domain Description: GIIM Note: maturase Location: 1 073-1 271 bp Sorry, your browser does not support inline SVG.
Associated domains:Seq: GL890551.1 Lachnospiraceae bacterium 6_1_63FAA genomic scaffold supercont1.4, whole genome shotgun sequence (331894 bp)
Overview 1 RT 1: 105460-111208 bp 2 RT 2: 153562-168557 bp Neighborhood of RT #1 [105460, 111228] PRK05402 AcrR RVT-Retrons TatD_DNAse PerM Neighborhood of RT #2 [153562, 168568] 2A0121 Uup Uup RVT-GII GIIM DDE_Tnp_1_4 HelD HelD VirD4 RVT-GII TraG_VirD4 InsE Feature: gene Location: 105460-107364 bp Feature: domain Description: PRK05402 Location: 105478-107359 bp Feature: domain Description: PRK05402 Location: 105478-107359 bp Feature: gene Location: 107380-107958 bp Feature: domain Description: AcrR Location: 107389-107779 bp Feature: domain Description: AcrR Location: 107389-107779 bp Feature: gene Location: 108283-109251 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 108445-109003 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 108445-109003 bp Feature: gene Location: 109335-110099 bp Feature: domain Description: TatD_DNAse Location: 109341-110094 bp Feature: domain Description: TatD_DNAse Location: 109341-110094 bp Feature: gene Location: 110089-111228 bp Feature: domain Description: PerM Location: 110155-111208 bp Feature: domain Description: PerM Location: 110155-1112 08 bp Feature: gene Location: 153562-154779 bp Feature: domain Description: 2A0121 Location: 153595-154684 bp Feature: domain Description: 2 A012 1 Location: 153595-154684 bp Feature: gene Location: 154900-156363 bp Feature: domain Description: Uup Location: 154912-155131 bp Feature: domain Description: Uup Location: 154912 -155131 bp Feature: domain Description: Uup Location: 155161-156343 bp Feature: domain Description: Uup Location: 155161-156343 bp Feature: gene Location: 156547-157830 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 156784-157372 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 156784-157372 bp Feature: domain Description: GIIM Note: maturase Location: 157432-157663 bp Feature: domain Description: GIIM Note: maturase Location: 157432 -157663 bp Feature: gene Location: 158806-160122 bp Feature: domain Description: DDE_Tnp_1_4 Location: 158833-160117 bp Feature: domain Description: DDE_Tnp_1_4 Location: 158833-160117 bp Feature: gene Location: 160322-162523 bp Feature: domain Description: HelD Location: 160331-161435 bp Feature: domain Description: HelD Location: 160331-161435 bp Feature: domain Description: HelD Location: 161603-162461 bp Feature: domain Description: HelD Location: 161603-162 461 bp Feature: gene Location: 163278-163964 bp Feature: gene Location: 164044-165030 bp Feature: domain Description: VirD4 Location: 164110-164899 bp Feature: domain Description: VirD4 Location: 164110-164899 bp Feature: gene Location: 165251-167158 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 165581-166325 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 165581-16632 5 bp Feature: gene Location: 167847-168128 bp Feature: domain Description: TraG_VirD4 Location: 167856-168114 bp Feature: domain Description: TraG_VirD4 Location: 167856-168114 bp Feature: gene Location: 168281-168568 bp Feature: domain Description: InsE Location: 168290-168557 bp Feature: domain Description: InsE Location: 1682 90-168557 bp Sorry, your browser does not support inline SVG.
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